Gene Dhaf_4712 details

Gene Information

• Locus tag: Dhaf_4712
• Symbol: smpB
• ID: 7261741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 5028489
• End bp: 5028959
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 643564623
• Product: SsrA-binding protein
• Protein accession: YP_002461143
• Protein GI: 219670708
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000000106723
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCATCTG AAGGGATAAA AGTCATCTCT GACAATCGAA AAGCCTATCA TGATTATTTT 
GTGGAAGAGA AGCTGGAAGC TGGAGTTATC CTCACCGGAA CCGAGATCAA ATCCATTCGC 
AACGGGCGTG TCAATCTCAA GGACAGCTAT GCCCGGATCG AAAACGGTGA AGTCTGGCTT 
TATCAGCTGC ACATCAGCCC CTATGAGCAG GGGAACCGTT TTAATCATGA TCCCCTGCGC 
AAGCGCAAAC TCCTCCTTAA CCGCTCCGAG ATCATCAAGC TGGTCGGGAA AGTGCAGCAA 
CAGGGCCTGA CCCTGATTCC CACCAAGATT TATCTTAAGC GTGGCCTGGC TAAGATCGAA 
CTCGGGGTCT GCCGGGGGAA AAAGAACTAC GATAAACGCC AGGATATTGC CGAGCGGGAT 
GCTAAACGTG AGATTGAACG GCACTTCCGG GATCAGGGCA AAGGATATTG A 

 

Protein sequence

MASEGIKVIS DNRKAYHDYF VEEKLEAGVI LTGTEIKSIR NGRVNLKDSY ARIENGEVWL 
YQLHISPYEQ GNRFNHDPLR KRKLLLNRSE IIKLVGKVQQ QGLTLIPTKI YLKRGLAKIE 
LGVCRGKKNY DKRQDIAERD AKREIERHFR DQGKGY