| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4704 |
|---|
| Symbol | |
|---|
| ID | 7261733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5023475 |
|---|
| End bp | 5024452 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643564615 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002461135 |
|---|
| Protein GI | 219670700 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAC AAGTATACCC GGATATTTTT AAAATCCCCA TCGTTCTTCC CAACAACCCT
TTGAAAGCCA CTAATGCCTA TTATATTAAA GGGAAAGAAC GAAATCTGCT CATTGACACA
GGCTTTAACC GGAGGGAATG CAAGGAGTCC ATGGATCAAG CACTGGCTGA TCTGGGTATT
GCTATGGAGA ATACGGATAT CTTCATAACT CATCTGCATG GGGATCATTC AGGTTTAGCC
GGTTATCTGT CCCGGCCGGA TAACACAATC TATACCGGCA AGTATTGTGC CGATACGCTG
CTGGGGTATG CAGGGGCAGG GCTCCATGGC TTCTTAAATG AGCTGATCGC TCAAAGCGGA
CTGACCAATA TCACGATGTC CGACCACCCC GGGTATACCT ATGCCAGCGA CATCATCGAG
GAGGCAACAA ACATACAGGA TGGGGATATT CTTCAAGTTG GCGAATTCAG TTTCCAGTGT
ATTGAGACCT CAGGTCATGC ACCGGACCAT TTTTGCCTTT ATGATCAAGA ACGAAAAATC
CTTTTCTCCG GCGATCACAT CCTGGGAAAA ATTACTCCCA ATAATACCAT TTGGGCACCG
CCGGCGACAA TCACCAGGGA TTATCTCGGC GACTATCTGG AAAGCCTAAA TAAAATTGCC
GCACTGGATA TCAAGGTGAT TTTTCCCGGA CATCGTTTCG TGCTTGAGGA TGGATATAAA
CGGATCGAAG AACTGAGAGA TCATCATCAA CGGCGGCTGG AAGATGTGAT GAAGATTCTT
GGTGAAAAGA GCATGACGGG AGCCCAGGTG GCTGGCCAAA TGCAATGGGA TCTGACCATT
AGGTCCTGGG AGGATTTTCC GCCGGCCCAA AAATTATTTG CCACTGGAGA AGCTCTGGCC
CATCTAACCC ATCTGGTCTT TCAAAACATG GTGGGCAGAG AATTAAAAGA CGGGGTGGTT
TATTATACAA GAGTATAA
|
|---|
| Protein sequence | MIEQVYPDIF KIPIVLPNNP LKATNAYYIK GKERNLLIDT GFNRRECKES MDQALADLGI
AMENTDIFIT HLHGDHSGLA GYLSRPDNTI YTGKYCADTL LGYAGAGLHG FLNELIAQSG
LTNITMSDHP GYTYASDIIE EATNIQDGDI LQVGEFSFQC IETSGHAPDH FCLYDQERKI
LFSGDHILGK ITPNNTIWAP PATITRDYLG DYLESLNKIA ALDIKVIFPG HRFVLEDGYK
RIEELRDHHQ RRLEDVMKIL GEKSMTGAQV AGQMQWDLTI RSWEDFPPAQ KLFATGEALA
HLTHLVFQNM VGRELKDGVV YYTRV
|
|---|
| |