| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4588 |
|---|
| Symbol | |
|---|
| ID | 7261617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4884875 |
|---|
| End bp | 4885468 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643564505 |
|---|
| Product | SirA family protein |
|---|
| Protein accession | YP_002461025 |
|---|
| Protein GI | 219670590 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
|---|
| TIGRFAM ID | [TIGR03527] selenium metabolism protein YedF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.282378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACCA TCGATGCTCT GGGACAAGTG TGCCCCATCC CTGTGATTCG TGCCAAGAAA
GCCCTGGAGG GATTGGGCGA AGCAGGGGGA GTCGTGGCGG TACTGGTGGA TAACGATATA
TCGCGGCAAA ATCTGCAAAA GATGGCCGAA GGTATGGGCT ATCAGAGTGA GTATCAGGAA
AAAGACAACG GCGTCATTGA AGTCACCATT GTCGCTGGAG AAGGCTGTGC TGTTGAAACC
TCCGGAACGC CGGCAGATTC AGGCCTGGTG GTCGCCATCG GGCGGAACAC CATGGGAGAA
GGCAGCGAAG AACTGGGACG AATTCTCCTT AAAGGGTTTA TCTATTCCCT CAGAGAGCTG
ACCCCGCCGC CTGCCCGCCT TCTCTTCTTT AATTCCGGAG CCTATCTGAC CAGTAAGGAC
TCTAACAGCA TAGAAGATTT AAAAGCCATG GCGGCTCAAG GAACCATCAT TCAAACCTGT
GGTACCTGCA TCAACTATTA TGGTATTACC GAGCAACTGG CGGTAGGCCA GGTGGCCAAT
ATGTATGATA TCGTCACCGC CATGGCCGAG GCCAAACGCC TCATCAATAT TTAG
|
|---|
| Protein sequence | MITIDALGQV CPIPVIRAKK ALEGLGEAGG VVAVLVDNDI SRQNLQKMAE GMGYQSEYQE
KDNGVIEVTI VAGEGCAVET SGTPADSGLV VAIGRNTMGE GSEELGRILL KGFIYSLREL
TPPPARLLFF NSGAYLTSKD SNSIEDLKAM AAQGTIIQTC GTCINYYGIT EQLAVGQVAN
MYDIVTAMAE AKRLINI
|
|---|
| |