Gene Dhaf_4555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4555 
Symbol 
ID7261584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4847700 
End bp4848713 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content49% 
IMG OID643564472 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_002460992 
Protein GI219670557 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCC GATTAGGCCT ACTTATGTTC CTTGTGTTAG TGGTATTTCT AATATTAACA 
GGGTGCGGCA ACACCGGTGG CAAACAAGAC CAACTCACCA AAATCCGAGT CTCGGAGGTC
ACCCATTCCA TCTTCTATGC ACCCCAATAT GTGGCCCTGT CTCAAGGCCT TTTTGAAGAA
GAAGGACTGG AGATTGAGCT GACCAACGGA GGCGGAGCGG ATAAAGTCAT GACCGCCGTC
TTGACGGGTC AGGTGGAGGT TGGTCTTGCC GGTCCGGAAG CCACCATTTA CGTGTACAAT
GAAGGGAAAG AGGATAATGC CATCGTCTTC GCTCAGCTGA CCAACGGGGA CGGAACCTTC
CTCATCGGCA GGGAGGAGGA CCCTGACTTC AGCTGGAGCG ATCTTAAAGG AAAAACCATT
ATTGGCGGCA GAAAAGGGGG CATGCCCGAA ATTATCCTGC AATATGTGCT CCGCAATAAC
GGATTGACCC CGGGAAAGGA TGTTTTCATC GATACCACCA TGCAATTTAA CGCCATGCCC
GGAGCTTTCC TGGGTGGTCA AGGGGATTAT GTCATTCTTT TCGAACCTAC AGGCTCCATG
ATGGAGAAGG AGGGGAAAGC TTACATTGTG GCTTCCCTGG GCAAGGAAAG CGGCGAAGTG
CCTTACACGG CTTATTTTGC CAAGAAGAGC TATATGGAGA GAAACCCTAA TATCATCCAG
AAGTTTACCA ATGCAGTCTA CAAAGGCCAA CTCTGGATAG AATCCCACTC ACCGGAGGAA
ATCGCCCAAG CGATTAAAGC TCATTTTCCA GATACAGAAG AAGAGGTTTT GACCACGGTT
GTGAAACGCT ACAAGGAGCA AAACAGCTGG AAGAAGGATC CCGTCTTGCT GGAAAAAGAT
CTCCATGTTC TGCAAAAAGC TCTGCAGGAT GCCGGGGAAT TGAGTAAAAC CGCACCTTAT
GAAAAAATTG TCACCCCCGT CTTTGGCGAT GCTGCCATAA AAAATATTAA ATAA
 
Protein sequence
MKRRLGLLMF LVLVVFLILT GCGNTGGKQD QLTKIRVSEV THSIFYAPQY VALSQGLFEE 
EGLEIELTNG GGADKVMTAV LTGQVEVGLA GPEATIYVYN EGKEDNAIVF AQLTNGDGTF
LIGREEDPDF SWSDLKGKTI IGGRKGGMPE IILQYVLRNN GLTPGKDVFI DTTMQFNAMP
GAFLGGQGDY VILFEPTGSM MEKEGKAYIV ASLGKESGEV PYTAYFAKKS YMERNPNIIQ
KFTNAVYKGQ LWIESHSPEE IAQAIKAHFP DTEEEVLTTV VKRYKEQNSW KKDPVLLEKD
LHVLQKALQD AGELSKTAPY EKIVTPVFGD AAIKNIK