| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4505 |
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| Symbol | |
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| ID | 7261534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4788550 |
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| End bp | 4790382 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643564422 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002460942 |
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| Protein GI | 219670507 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000203589 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATTG ACGCTGTGTT AATTAATCTG GCAGTGTTTT TAAGCTTTTA TATTCGTTTT
GCTGTGGATG GGGACGGAAC CATACCTGAG GAATATCTGC TCACACTGAC TCATTCCGCC
TGGACGGCAA CCCTGATTTA CTTAAGTGTG TTCTATATTT TCGGCTTGTA TAACAAGCTC
TGGCAATATG CCAGCATTGG CGAGCTCATA TCCATCATCT TTGCCGTGAC CGTCGCCGCA
GCAGGGACAA TCACCGTAGT GTATTTCATT GCTCCCATGC GTTTTCCCCA TACAGTATCG
GCTCTTATGT GGTTCAGTAC TCTCTTCTTA ATTGGCGGCT CCCGTTTTAT TTGGAGAATC
CTTCAGGACA ATATTTTTAC TCCCCATGTG CCCGGCTCTC AGAATCAAGT CCTGATTATT
GGCGCAGGGG ATGCGGGAGT GATGGCCGCC CGGGAGCTGA AAAACAAAAA CTATCGGGAA
GGCCGTCCTG TGGGCTATAT CGATGATGCA GCCACCAAGC AAAGACTGCA GCTCATGGGG
ATTCCTGTCT TAGGCACCCG CCGGGATATC CCCCGGGTCG TTAAGAACCA TAATATTGAT
AAGATTATTA TCGCCATGCC TTCGGCTTCC GGGGACGTCA TCCGGGAGAT CGTGGGCATC
TGCGAAAAAA CCGGTGTGGA TCTGAAGATC ATGCCCGGTG TGTTCGACGT GGTCAGCGGT
AAAGTGGATA CCAAAGAAAT CCGCCAGGTT CAAGTGGAGG ATTTGCTGGG GCGTGAAGCC
GTCACCGTCG ATCTGGAGGA TGTAGCCGGT TACCTTGCAG GTGAAGCGGT CCTGATTACC
GGCGGCGGCG GGTCCATCGG CTCGGAGCTT TGCCGGCAGG TCGCCCGCTT TAACCCGGCT
AAACTGGTTA TCGTGGGCCA TGGCGAAAAC AGCGTCTTTG ACATCGAACA GGAACTGCGC
TCGGAAAACC CGGGGTTGGA TGTGGTCACG GAGATTTTGG ATATCAAGGA CCGGGAAAAA
GTCCATCTCG TCTTCCAGCG CTATAAACCG GGTGTGGTGT TCCACGCCGC GGCCCATAAA
CATGTCCCTC TCATGGAAAA GAATCCGGAA GAGGCCATGA AAAATAACAT TATGGGTACC
AGCAATCTGG CCGAGGCAGC GGATGCCGCC AAGGTCAAGA CCTTTGTCCT GATTTCCACC
GATAAGGCAG TCAATCCCAC CAGTATCATG GGGGCCACCA AGCGGGTGGC GGAGATGGTG
ATCCAGAGCA TGGACAAGCG TTCTGACACC AAGTATGTGG CGGTACGTTT TGGCAATGTA
CTGGGCAGCC GGGGAAGCGT TATTCCCACC TTTAAGCGTC AGATTGCCAA AGGCGGGCCG
GTTACAGTCA CTCATCCCGA TATGGTTCGC TACTTTATGA CCATACCTGA AGCCTCCCAG
CTGGTGATTC AAGCCGGCTC CATGGCTCAG GGGGGGGAGA TTTTTATCCT GGATATGGGT
CAGCCGGTCA AGATTCTGGA TCTTGCCCGG GATCTCATCC GCCTCTCCGG GTTTGAACCG
GATGTGGATA TCAAGATTAA ATTCACAGGG ATGCGCCCCG GTGAAAAACT CTTTGAAGAA
CTCCTTACCG CAGAAGAAGG GACTTCAGCG ACGAAACATA AACGGATTTT CGTAGCCAAA
CCCAATAATA TCAATGTTTC ACAGCTTGAG GAACTTATCC ACCTCATCCG TGAGCGGGGC
TCCTATCTCA CCCGGGAAGA AGTTATGGGA CAGTTACAAG CCATTGTGCC TACATTTAGA
AAGCAAGCTT CCAAGGCAGT TGCCAATCAA TAA
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| Protein sequence | MVIDAVLINL AVFLSFYIRF AVDGDGTIPE EYLLTLTHSA WTATLIYLSV FYIFGLYNKL
WQYASIGELI SIIFAVTVAA AGTITVVYFI APMRFPHTVS ALMWFSTLFL IGGSRFIWRI
LQDNIFTPHV PGSQNQVLII GAGDAGVMAA RELKNKNYRE GRPVGYIDDA ATKQRLQLMG
IPVLGTRRDI PRVVKNHNID KIIIAMPSAS GDVIREIVGI CEKTGVDLKI MPGVFDVVSG
KVDTKEIRQV QVEDLLGREA VTVDLEDVAG YLAGEAVLIT GGGGSIGSEL CRQVARFNPA
KLVIVGHGEN SVFDIEQELR SENPGLDVVT EILDIKDREK VHLVFQRYKP GVVFHAAAHK
HVPLMEKNPE EAMKNNIMGT SNLAEAADAA KVKTFVLIST DKAVNPTSIM GATKRVAEMV
IQSMDKRSDT KYVAVRFGNV LGSRGSVIPT FKRQIAKGGP VTVTHPDMVR YFMTIPEASQ
LVIQAGSMAQ GGEIFILDMG QPVKILDLAR DLIRLSGFEP DVDIKIKFTG MRPGEKLFEE
LLTAEEGTSA TKHKRIFVAK PNNINVSQLE ELIHLIRERG SYLTREEVMG QLQAIVPTFR
KQASKAVANQ
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