Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4433 |
Symbol | |
ID | 7261462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4701975 |
End bp | 4703087 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643564354 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002460874 |
Protein GI | 219670439 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 84 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGAGG AGAAGAATCG AAGGTCTTTG TCCTGGAATT GGCCCTTGAA TGTGATGGAC TATGATCAAT CCACCCAGCA TATTTTTGCT CAGGTCTTTG AGTTTGCTCA GGAGGGTATC TGCATCACCA ATGCCCAAGG GGATATTATC TACGTCAATC CCGCTTTTAC GAAAACCACA GGCTTCACCC TGGAGGAGGC TCTCGGGAAA AATCCGCGGA TACTCAAATC CGGGCGGCAT TCCTATGGGT TTTATACACA GATGTGGAGG GATTTGACTA AGAAAGGCCA ATGGCAAGGA GAGATTTGGA ATAAGCGCAA AAATGGGGAG ATCTACCCGG AATGGCTGAA CATTCATGCG GTTCGCGATG AGAAAGCCGT ACTCACCCAT TATGTCTCTA TTTTTCGGGA TATGACTGAC GAAATGCTGA TTCTTAAAGA GGTTCAATTA GCGGGGCAGA TTCAGAAAAA TATTTTAAGG TCCGATTTCT CCGATGAACA TCTCAAGATG AGGAGCATCT ATCTCCCTTA CCACCATTTG AGCGGGGATT ATTACGATTA TCGCTGGGAT GAGAAGAACC GGGTCCTGAA AGGGTTCCTC TTTGATGTCA TGGGTCATGG GGTGGCGGCA GCGCTGCAGG TGACCGCATT AAGAGTTCTT TTTCGTCAGG TGGTAGGACG CAAAATCCCC CTGGCGGAAA AGGTGGAATG GGTGAACCAT GAGGCGAAAA GCATTCTCCC CGAGGATAGT TTTGCCGCGG CGATCTTTTT CGATATCGAC ATCGGTCAAG GCAAGTTCAG CTATGTCATG GCCGGAATCA ATCATTTGCT GTACTATTCG TCGGAAAGAG GACAACCGGG TATCAGGGTC TTAAGCCAAC CGGGCCTCTT CCTGGGGATT TCAGAGCACG CGGAGTTTGA AGAGCATGAG TGTTCCCTTA AAGCCGGGGA TGGGATGATT TTCCTCACGG ACGGATTTTA TGATTTGGTT CAAGAGAAAG AATGCCCGCT TCAGGTCATG ACCATAGAAA GCACTATGCA TTGGCTGGAT TCCTTATCCA CAGGCAACGA ACTGAACGAT GATGCCACTG CGTTAGGATT TATCTGCTGC TAG
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Protein sequence | MKEEKNRRSL SWNWPLNVMD YDQSTQHIFA QVFEFAQEGI CITNAQGDII YVNPAFTKTT GFTLEEALGK NPRILKSGRH SYGFYTQMWR DLTKKGQWQG EIWNKRKNGE IYPEWLNIHA VRDEKAVLTH YVSIFRDMTD EMLILKEVQL AGQIQKNILR SDFSDEHLKM RSIYLPYHHL SGDYYDYRWD EKNRVLKGFL FDVMGHGVAA ALQVTALRVL FRQVVGRKIP LAEKVEWVNH EAKSILPEDS FAAAIFFDID IGQGKFSYVM AGINHLLYYS SERGQPGIRV LSQPGLFLGI SEHAEFEEHE CSLKAGDGMI FLTDGFYDLV QEKECPLQVM TIESTMHWLD SLSTGNELND DATALGFICC
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