| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4393 |
|---|
| Symbol | |
|---|
| ID | 7261422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4663769 |
|---|
| End bp | 4665016 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643564314 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002460834 |
|---|
| Protein GI | 219670399 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACC TCCATCAATT TGACCTGAAT GAGTCTATAA AGCTTTTAAA ATTAGAGCAG
GACCAATTGC TGCTGCTGAA AGAATTTAAG CCTGTTATGG AGCAGGATGT GGATCAAATC
GTTGATCAGT TCTATGCTCA TATTACGAAG ATTTCTCAAC TGAACGGGAT AATCAAGGAG
TTTTCTTCTG TAGAGCGGCT CAGAGGTTTG CAGAGAAATT ATCTACTCTC GATTTTTCCC
GATGTCATCG ACGAAGGGTA TATTATGAGC CGGATCAGGA TTGGGGATGT ACATAAGCGT
ATTAATCTGC CGCCCTTTGT TTATTTAAGC TCTTATCAAA CCTTCTTTGA CTTGATTTTG
CCAAGAATTT TTGCCCATTA TCGAAAGAAG CCGGAGCAGG CTTTGCGGTT AAGCCTTGCC
GTACTGCGGA TCTTCAGCTT TGATCAGCAA GTGGTGATGG CCAGTTATAT CCAGTCCTAT
ATAGCGGATC TTGATAAGAA AGAGGAGCTG GAAAAAGCCT ACGAGGAGAT TGACGTTTTG
CAGCACCGGG TCAGTGAAGC CAGCCAGGCC CTGGCAGCGA CTTCGGAACA GACCGCTGCT
TCGGCGGCTC AGATGCATGA GGCGACTGAG CTCATCTCGC AAAATGCCGG TGATGCGGCA
GATTTTTCTC GTAAAGTGGA TAACCTGGCT CAGGAAGGGG CCCAGAAGAT TCAACAGATT
TCCGAGCGTA TCTTAGGGCT GGCAGGGATG TCGGAAAAAA TGCAGGAAAA GATGGCGGAG
CTTGATCGCA GTTCGGCCCG GATCGCCAAT ATTACAGATG TCATTAAAGA AATCGCTTCC
CAAACCAACC TCTTGGCCCT TAATGCGGCC ATTGAAGCCG CCCGGGCCGG GGAGTCCGGC
AGAGGGTTTG GGGTGGTGGC GGAGGAAGTG AAGAAACTCG CCAATAATTC TGAGCAATCG
GTTAAGGAAA TCAGCACTAT GATTGCAGTA ACCCGGCAAA ATACCACGGC CGTGAGCAAG
GTGATTGAAG ATACGACCAA GGCGATGCAT GAAGCGGCAT CTGAAGCGCA GGAAGTGGTC
GCCCGCTTTG GGGACATTAT GAGCGCTATT CAATCCAGTA TTCAGCAGGT TCGTGAGATC
GCTACCCAGA TCGACGCTCT GACCATGACG GCCGGCCAGA TTGGGGCTGC TTCCGAAGAT
GTGGCCAATT CAGCAACATC ACTGGCCCAG ATGGGATTAA GGGAGTAA
|
|---|
| Protein sequence | MINLHQFDLN ESIKLLKLEQ DQLLLLKEFK PVMEQDVDQI VDQFYAHITK ISQLNGIIKE
FSSVERLRGL QRNYLLSIFP DVIDEGYIMS RIRIGDVHKR INLPPFVYLS SYQTFFDLIL
PRIFAHYRKK PEQALRLSLA VLRIFSFDQQ VVMASYIQSY IADLDKKEEL EKAYEEIDVL
QHRVSEASQA LAATSEQTAA SAAQMHEATE LISQNAGDAA DFSRKVDNLA QEGAQKIQQI
SERILGLAGM SEKMQEKMAE LDRSSARIAN ITDVIKEIAS QTNLLALNAA IEAARAGESG
RGFGVVAEEV KKLANNSEQS VKEISTMIAV TRQNTTAVSK VIEDTTKAMH EAASEAQEVV
ARFGDIMSAI QSSIQQVREI ATQIDALTMT AGQIGAASED VANSATSLAQ MGLRE
|
|---|
| |