Gene Dhaf_4227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4227 
Symbol 
ID7261251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4473583 
End bp4476036 
Gene Length2454 bp 
Protein Length817 aa 
Translation table11 
GC content49% 
IMG OID643564145 
Productmolybdopterin oxidoreductase 
Protein accessionYP_002460670 
Protein GI219670235 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG AAAAGAACAG CCTCAATCCT AACCTGTCCC GCCGCACTTT CTTAAAGGCA 
TCAGGAGCAA CTGCGGTCAC GGCGGGAGTC GTTGCTGCCA ACCCCTGGGG AACGGCTATG
ACGGCTTTGG CTGATGAGGA ACAAACTTCA GCAGCGGGAG AGGAAGAACA AATCTTCAGC
GGCGCCTGTC GCGGCAATTG TGCAGGCGGA TGTTTTCTGA ATATCCATGT GCGGAATGGC
AAAGTGGTAA GAACCTCAGC CCGTGAGATG CCGAATCCGG AATATAACCG CATCTGTGTT
AAAGGATTAA CCCATGTCCA GAGGATTTAT AGCAAGGAGC GCCTGAAATA CCCCATGAAA
CGTGCCGGGG AACGGGGCGA AGGAAAATGG GAACGAATCA CTTGGGATGA AGCCATCAGC
ACCATCGCCC AGAAGTGGAA AGGCTACCAG GATGAGTTTG GCAAATATGC TTTTGGAGTT
ATGTGGAGTT CAGGAAGCTA TGCTGCGCTG AGTGGCGTCG GGATTGGCAG CGCTATCAAC
CGCCTGCAAA ATGCCAACGG GGCCTTGAAT ATTACAGCAG CTGTAGATAT GGCACGGGGA
CAAGGAACGA AACCGGCTCT CGGTCAAGGT ACATTTGTTA CAGCTAATGA ACCCGCGGAC
TTAAAAAATG CCAAGACGAT TTTCTGTTGG GGGGCTAATC CTGTAGGCGC CCAGCAGCAA
AGCACCCATT TCTTTTTAGA AGCCAGGGAA AAAGGTGCTA AAATCGTGGT CATTGATCCC
AATTTCAACG CCTTAGCGGC CAAAGCGGAT ATCTTTGTCC CGGTAAGGCC GGGCTCTGAT
GCGGCGTTGG CCCTGGGGAT GATGAATATT GTGGTCCGGG AAAACTGGGT GGATGAGCCT
TTTTTGAAGA AATCCACAGG GGCCCCTTTC TTAGTCAAGG AATCTGATGG AAAGTTTTTG
CGGCAAAGTG ATTTAGGAAT CCATATCCCT GAAGGAGCCA AGGATGAGCT AATCGTCTGG
AACCAAGACT CTGACACTTA TGGAACAGCC GATACCGTCA GTAACCCGGC GTTGCGGGGC
TCTTATACTA TCAATGGGGT TAAGGTTACG ACAGCCTATG ACCTGCTGTT GGAGCGCATC
GCTGAATACC CGCCGAAAAA AGCAGCGGAA ATCTGTAATA TTCCTGTAGC GCAAATCGAA
GAAATCACGG AACTTTACGC GACCAATAAG CCTTCCGCAA TCTATGAGTT TTTCGGCATC
GATCATTATG TCAATGGCCA TTACGGCTAT TTTGCTATGG CGATCTTAGC CATTCTCACC
GGAAATCTCG GTAAACCGGG AGCTTTTTGC GGCATGGGTG AGAACCTGGC CACTGATTGG
ATCAATATGG CGGGAACGAT GTTTCCCAAT GGAGCGAAGC CCTCTCTTTC CGTACCTGTT
AATATGCTCA CTGAAATTCT GGAAACTAAA ATGTATGGTA AAACTCCCAT CGATTTGAAA
GGTATCTACT TTACCCATGT CAATCAGATC GGCAACGGCG CCGAGCGCAA AGCGACCCTG
GAAGTTATGA AAAAGCTGGA TTTTATCGCA GTCGCCGATC TGAATATGAA TGAAACGGCT
CAGTATGCAG ATATTCTGCT GCCTGTAGCC CACTGGTTTG AAGTGGATGA TGTTTTTGTC
AATTACAGCA CCCATCCTTA TGTGATATTG CAGGAGAAGG CCATTGAGCC TCTCTATGAA
TGCAAATCGG ACTTTGAGAT CTATCAATTG CTGGCGGAAA AACTTGGCTG CAGTGATGCC
TTTGCCATGG ATGAAGAGGA CTATATGCGG TTGTGGATGG ATACAGATGG AGCCAGAAAA
TTAGGGATTA CTTTAGAGAA GCTTAAAGAA GAGAAAATAC TCAGGGCTTT ACCCGGAGAT
CCCTATATTT ATGCTGAAGG CGGAGCATTT GCCACACCTA CAGGGCGGGC CCAGCTCTAT
AATGAGGCCC CTGCTCCCAA TAATAATTAT GATCAGGTGT TTGATCTAGC CAAAGAGCGC
CTGCCTCACT TTGAACCGCC CCTGGAAGCC TGGCATGAAA ATCCCCTCCA TGCGAAATAT
CCTTTCTCGG TGATCCAAGA CAAGGGAAGG TGGCGGACCC ACTCTCAATG GTGGGATGTC
CCGATGCTCA AAGAACTCAG CCCGGAACCC TTTGTGAAAA TCAACCCTGC CGATGCTGCC
GCCCGCAATG TTAAGACTGG TGATATCATC AAGCTCTACA ACGATCGGGG CTATGTCAAG
ATTAAAGCCA TTGTGGATCG CGGAATTCAA CCTGGTGTTT TAAGCCTGCC TAAAGGCCGG
GAAAAACAGG AATTCATCGA AGGGCACTAT CAGGATCTGA CCTCCCGGGT GATGAATATC
GTCTGTGCCA ACAGTGCCTT TTTTGATGTA CTGGTCCAAG TAGAAAAAGC TTAG
 
Protein sequence
MNQEKNSLNP NLSRRTFLKA SGATAVTAGV VAANPWGTAM TALADEEQTS AAGEEEQIFS 
GACRGNCAGG CFLNIHVRNG KVVRTSAREM PNPEYNRICV KGLTHVQRIY SKERLKYPMK
RAGERGEGKW ERITWDEAIS TIAQKWKGYQ DEFGKYAFGV MWSSGSYAAL SGVGIGSAIN
RLQNANGALN ITAAVDMARG QGTKPALGQG TFVTANEPAD LKNAKTIFCW GANPVGAQQQ
STHFFLEARE KGAKIVVIDP NFNALAAKAD IFVPVRPGSD AALALGMMNI VVRENWVDEP
FLKKSTGAPF LVKESDGKFL RQSDLGIHIP EGAKDELIVW NQDSDTYGTA DTVSNPALRG
SYTINGVKVT TAYDLLLERI AEYPPKKAAE ICNIPVAQIE EITELYATNK PSAIYEFFGI
DHYVNGHYGY FAMAILAILT GNLGKPGAFC GMGENLATDW INMAGTMFPN GAKPSLSVPV
NMLTEILETK MYGKTPIDLK GIYFTHVNQI GNGAERKATL EVMKKLDFIA VADLNMNETA
QYADILLPVA HWFEVDDVFV NYSTHPYVIL QEKAIEPLYE CKSDFEIYQL LAEKLGCSDA
FAMDEEDYMR LWMDTDGARK LGITLEKLKE EKILRALPGD PYIYAEGGAF ATPTGRAQLY
NEAPAPNNNY DQVFDLAKER LPHFEPPLEA WHENPLHAKY PFSVIQDKGR WRTHSQWWDV
PMLKELSPEP FVKINPADAA ARNVKTGDII KLYNDRGYVK IKAIVDRGIQ PGVLSLPKGR
EKQEFIEGHY QDLTSRVMNI VCANSAFFDV LVQVEKA