Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4155 |
Symbol | |
ID | 7261175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4399642 |
End bp | 4401831 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643564071 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_002460599 |
Protein GI | 219670164 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00201987 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGG AAGATAATCA AAACTTGGGA GTCGATTTGG GAGAATTTCT GGATTTTTAT CTTCTCGATT CACAGGAGCA AATCGAAAAA CTGGCAGCAG GGTTGCTGCA ACTTGAAAAA GAAGGCAATA ATGTCGGATT GATTAATGAT CTCTTTCGTT CTGCACACAG CTTAAAAGGA GCCTCCGGAA CCATGGGGTT TACTTCGATA GTGGCTTTGA CACACTCAGC TGAGGATTTA CTGGATCGGC TGCGCCAAGG CAAGATGGAA GTTTCGCTCC CCATGGTTGA TGTTCTTCTG GCGGTTACTG ATCGCGTCAA GGAGATGTTA AGCCAAGTGG AAAAGCGGGT GGAAATCACC GCAGAGTATC AGGATTTGGT GGATGAGATG CGGGCACTTA TGAATGGCGA AACACCTGCT CCGGTTAAAG AGGCGGATAG TAACGATATG AAGGAGAATT TAACCTCAAA TTATACGCGG GTAGATTTTC AACTGTCTCT TGAAGTGGCG GAACAGGTCA AAAGTTCACA GGATATGGGG CATGGAGTGT ATCAAGTCGA TATTAAATTT GCTCCCAATA CCTTGATGAG GGCAGTTCGT GCCGTCATGG CCGTACAGCG GATGGAGAAT CTGGGTAAAG TGGTTAAGCT CCGCCCCAGC GTGGAAGAGC TGGAAGTGGG CAGCGAAGAA GGCTTTGCCA TGCTGATTTT ATCTGATGAT CCCCCTGAAG AAATTCGTGG GGAGATTCTC CTTGTTTCTG AGCTGGCAGA GGTTGAGGTT CATCCTTACC GCATAGGTGA TGCTGTTGAC GGTTATGGCA GCGAAGAAGT GGCGGCGGCT CAAGCTGCTG AGTTGCTCCC GGTTGTGGAA GCGGCTCCTT CCTTACCTGT GCGGCCTGAG GCGAAACCTG TACAAGCGGC ACCGGTCATT CCGGCAGCGC CGGCTGCCCC TAAGCCCGCC GCCGGCAACG GCAACAATGC TGCCACAGAC GGGAATAACC AGGTCCATAC CATTCGGGTG GATACTGTAC GTATGGATAA TTTAATTAAT TTAGTAGGCG AGATGGTAAT TACCCGTACC CGCCTGGTTC AAATCGGTCA TGAGCTCAAG GAACAGTATC GCATGGATGC CTTGGTGAAT AACTTGAATG AGACTACTGT GTATCTGGGA CGATTGATGA GTGACCTGCA GGAAAGTGCT ATGCGTTTGC GCATGGTTCC TATCGGCACC GTATTCAGCC GCTTTCCCCG CTTGGTTCGG GACCTGGCCC GTAAGACCCA AAAGGAAATG GAGCTGGTCC TCCGGGGGGA AGACACGGAA CTGGATAAGA CAGTGGTGGA AGTTATCGGT GATCCCTTGA TGCATTTAAT CCGCAACTCC GTGGACCATG GCATTGAGAC TCCGGAGGAA CGCCGGGCGG CCGGTAAACC GGAACTGGGT ACCATCACCT TGGATGCTTA TCATGAAGGA AATCATATTG CCATACTGAT TTCCGATGAT GGCAAAGGCT TGGATCTGAA CAGAATCTAC GAAAAGGCGC TGAGCCGTGG GCTGGTTGGC GAGCGGGAAG GCCTCTCTGA GCGGGATATT GCCAACTTGA TTTTCTTGCC GGGGTTTAGT ACGGCTGATA AAGTAACAGA TATTTCCGGT CGGGGCGTAG GCATGGATGT GGTTAAGAAG GCCCTGAACA ATTTGGGCGG AATGATCGAC ATCACCACCC GCCAGGGGCA GGGCACTACG TTTACTATTC GCCTCCCCTT AACCTTAGCC ATTATTCAAG CGTTATTGGT TGAAGTCAGT ACAGAGATTT ATGCTGTTCC ACTATCTTCG GTCTTAGAGA CCTTGCTGGT AGAACGCAAG GATATTAAAA ATGTGGGCGG ATTACCCATG GTTCAGCTGC GCGGTAATAC ACTTCCCCTG ATCTCCCTCC GGGACAAATT CGAGCTTCCT GCTCCTGAAG CAGAAGCAGA AGAAGTCTTT GTCGTGGTCG TAGGGTTGGG AGATAAGGCA CTGGGCCTGA TTGTGGACGG ATTGCGCGGT CAACAGGAAG TGGTGATTAA ATCTTTAGGC GACTTCCTTA ATAACTTACC GGGTATTGCC GGAGCAACCA TCTTAGGGGA TGGCAAAGTT ACCCTGATTC TCGATATCGG CAGTTTGATT CAGGATATCC TTGTAACAAG GAAGGGCTAA
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Protein sequence | MSQEDNQNLG VDLGEFLDFY LLDSQEQIEK LAAGLLQLEK EGNNVGLIND LFRSAHSLKG ASGTMGFTSI VALTHSAEDL LDRLRQGKME VSLPMVDVLL AVTDRVKEML SQVEKRVEIT AEYQDLVDEM RALMNGETPA PVKEADSNDM KENLTSNYTR VDFQLSLEVA EQVKSSQDMG HGVYQVDIKF APNTLMRAVR AVMAVQRMEN LGKVVKLRPS VEELEVGSEE GFAMLILSDD PPEEIRGEIL LVSELAEVEV HPYRIGDAVD GYGSEEVAAA QAAELLPVVE AAPSLPVRPE AKPVQAAPVI PAAPAAPKPA AGNGNNAATD GNNQVHTIRV DTVRMDNLIN LVGEMVITRT RLVQIGHELK EQYRMDALVN NLNETTVYLG RLMSDLQESA MRLRMVPIGT VFSRFPRLVR DLARKTQKEM ELVLRGEDTE LDKTVVEVIG DPLMHLIRNS VDHGIETPEE RRAAGKPELG TITLDAYHEG NHIAILISDD GKGLDLNRIY EKALSRGLVG EREGLSERDI ANLIFLPGFS TADKVTDISG RGVGMDVVKK ALNNLGGMID ITTRQGQGTT FTIRLPLTLA IIQALLVEVS TEIYAVPLSS VLETLLVERK DIKNVGGLPM VQLRGNTLPL ISLRDKFELP APEAEAEEVF VVVVGLGDKA LGLIVDGLRG QQEVVIKSLG DFLNNLPGIA GATILGDGKV TLILDIGSLI QDILVTRKG
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