Gene Dhaf_4151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4151 
Symbol 
ID7261171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4397080 
End bp4397424 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content48% 
IMG OID643564067 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_002460595 
Protein GI219670160 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTA ATCCGATTGC ACCTGTCCAT CCTTTAATGC TTCAACAAAA CCTGAATCCC 
ATTCAGGAAA ATAACCCTGT TGAAGGGAGC GGACCGCAAA CTCCTGCCGG AGCGGCCAAA
GTAGGCGCTG ATTTCGGGCA GTTTTTACAG GAAGCCCTGC AAAAAGTAGA CAACCTTCAA
AAGGAAGCCG ATGTAGCCAG TCTCGGCTTA GCCACCGGGC AGATTCAGGA TCTTCATACC
GCAGTAATTG CCATGGAAAA GGCCGGACTT TCTTTATCCT TAACTGTGGA CGTCCGCAAT
CGAGCCTTGG ATGCCTACCA TGAAATCATG AGGATGCAAA TATAA
 
Protein sequence
MAFNPIAPVH PLMLQQNLNP IQENNPVEGS GPQTPAGAAK VGADFGQFLQ EALQKVDNLQ 
KEADVASLGL ATGQIQDLHT AVIAMEKAGL SLSLTVDVRN RALDAYHEIM RMQI