Gene Dhaf_4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4113 
Symbol 
ID7261133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4362249 
End bp4363001 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content53% 
IMG OID643564030 
ProductPhosphoadenylyl-sulfate reductase (thioredoxin) 
Protein accessionYP_002460558 
Protein GI219670123 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGAT CGGATTTCAA TTTGGATCTT GATGAGATAA ACCGAGCCTT TGCCGGGGAA 
GACCCCCGCA AGCTTTTGGC CCATGTGGTG GAAAAAATCG GTCCGGCGCG GATTGCTCTG
GCTTCCAGCC TTTCCATTGA GGATCAAGTA CTGACCCAGA TGCTATTAAA GATCGATGCC
CGGGCCCGGA TCTTCTTTAT CGATACAGGC CGGAATTTTC AGCAGACTTA TGATCTGATG
GAAGAGACCA TGAGTCGCTA TGAGTTTCAT TATGAGGTAT ACGCGCCGGA GAATTCGGAG
CTGGAGCCAT TTCTGGCGGA ATATGGCCCC AACGCTTTTT ATGACAAGGT TGAACTGCGC
CAAAAATGTT GTGAGCTGAG AAAAGTCAGG TCCTTGCAGC GGGTCTTATC TACCGTAGAT
GGCTGGATTT GCGGACTGCG CAAGGAGCAG AGCCCCACCC GCCAGGAAAT CGGTTTGCTG
GAATGGGATT CCCGCCACGC TATCTATAAA GTGAATCCTC TGGCGGCCTG GAGCGAAGAG
CAGGTTTGGG CTTATATCCG CCGGGAAAAC ATTCCCTACA GTTCCCTATA CAACAAAGGT
TTCCGCAGCA TTGGCTGTCA GCCCTGCACC CGGGCGGTGG CCCCCGGGGC GGATGTACGC
AGCGGCAGGT GGTGGTGGGA AGATCCCTCT AAAAAAGAAT GCGGGCTGCA TCCATCCCTG
AACCCGCCTG CAAAGGAGGA AGAAAAGCGA TGA
 
Protein sequence
MDRSDFNLDL DEINRAFAGE DPRKLLAHVV EKIGPARIAL ASSLSIEDQV LTQMLLKIDA 
RARIFFIDTG RNFQQTYDLM EETMSRYEFH YEVYAPENSE LEPFLAEYGP NAFYDKVELR
QKCCELRKVR SLQRVLSTVD GWICGLRKEQ SPTRQEIGLL EWDSRHAIYK VNPLAAWSEE
QVWAYIRREN IPYSSLYNKG FRSIGCQPCT RAVAPGADVR SGRWWWEDPS KKECGLHPSL
NPPAKEEEKR