Gene Dhaf_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4048 
Symbol 
ID7261068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4296372 
End bp4297370 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content50% 
IMG OID643563966 
Producthypothetical protein 
Protein accessionYP_002460494 
Protein GI219670059 
COG category 
COG ID 
TIGRFAM ID[TIGR02828] putative membrane fusion protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.13497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGGA GGAGCCCAAG GAGGGGAATT TATAAAGTTG TTCGGGTGTT TGGTGTCAGC 
GTTTTTCTTC TTCTTCTCTT GGGTTCGCTG GGATGGGTTT ACCGTTCCAG CTTCCTGACA
GGATCTCTTA AGGTTGAGAT CGCCAGGCAA GGGAGTATTG ACCATCTCCA GACTGTCGCG
GCGGTTTTTG CCAATGAGGA AACCTTGCTT AAAGCACCTG GCGCAGGAAC AACCGAGTTT
CTGGTTCAGG AAGGAGAAAG AGTACGCAAG GGGGACCTGA TCGCCAGGAT TCATTCCGGA
GGGGTGGTGC TGGGACAGGA GAATGCCGCT GCCGCCCATG ACCTCTATGC CTCCAGCGGC
GGTATCGTCT TTTCTGTCAT CGATGGATTG GAAACGTATT TAACCCCTGA AAATCTCCTG
GCCATGGATG TGGGTAAAAT TCTTCAACCG ACCCAGGAGC TATCCACAAC TCAGGAAGCT
CAGGAAGCTC AGGAGCCGTC CCCCCCTCAG AGCAGCGGGA GTGTGGCGGC AGGAAAAGTG
ATCGGTAAGA TAGTCAACAA TCTCAAACCT ACGGTGGCGG TGCTCAAAGT TGAGCCTAAG
GGGTATGAGG TAGGGAAAAG CGTTAAGCTG ATCATTGATG ATCAGAATTA CAGTGCCAAG
ATTCTGCGCC TTCTGGATAA TCCCCATGGT CTGGTCGTTC AATTTAACCA ATATATCAAT
GGGACAAGCC AAAAGAGGCT CCAGGATATT TCCCTTGTGC AGAGACCTTC GGTCAGCGGG
GTGCTTGTTC CTAAGAGCAG CTTGTGGAGT AAAGGGGAAG AGCAGGGGGT CTATGTGGTT
AAGGAAGGGG CTATTCAGTA CCGCAAAGTC AAGATTTTGG ATCAAAATGA CCAGGTCATT
TGTGTTGAGA ACCTGCCCCA TGGAATTCCC GTCATCACTA ATCCCCGAAC GGGCATCGAT
GGGCTGATCA TGAATATAAA AAATGTTTCT CAATCTTAA
 
Protein sequence
MKRRSPRRGI YKVVRVFGVS VFLLLLLGSL GWVYRSSFLT GSLKVEIARQ GSIDHLQTVA 
AVFANEETLL KAPGAGTTEF LVQEGERVRK GDLIARIHSG GVVLGQENAA AAHDLYASSG
GIVFSVIDGL ETYLTPENLL AMDVGKILQP TQELSTTQEA QEAQEPSPPQ SSGSVAAGKV
IGKIVNNLKP TVAVLKVEPK GYEVGKSVKL IIDDQNYSAK ILRLLDNPHG LVVQFNQYIN
GTSQKRLQDI SLVQRPSVSG VLVPKSSLWS KGEEQGVYVV KEGAIQYRKV KILDQNDQVI
CVENLPHGIP VITNPRTGID GLIMNIKNVS QS