| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4041 |
|---|
| Symbol | ileS |
|---|
| ID | 7261061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4289921 |
|---|
| End bp | 4292689 |
|---|
| Gene Length | 2769 bp |
|---|
| Protein Length | 922 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643563959 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_002460487 |
|---|
| Protein GI | 219670052 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00112426 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACC GGAATACATT GAATTTACCG GAAACGGACT TTCCGATGCG GGGAAACCTG
CCCCAGCGGG AGCCGGAAAT TTTGCAGAAA TGGGAAGAAG AAGATATCTA TGCTACGGTG
CAAAAGGCCC GGGCAGGGCG GCCGAAATTT GTTCTTCACG ATGGCCCTCC TTATGCCAAT
GGTGATATTC ACCTTGGCCA TGCTCTGAAT AAAGTGATCA AAGACATTAT CGTTAAATAC
AAAACCATGG CAGGGTTCGA CGCCCCCTAT GTTCCCGGCT GGGATACTCA TGGTCTGCCC
ATCGAGCAAC AGGTCATCAA GAAATTAGGG GTTAATCGCC ATGCTGTTTC GGTGGTGGAA
TTCCGCCGGA TGTGCAAAGA GTATGCCAAA AAATATATCA GCATTCAGAA AGAGCAGTTT
AAGCGGTTAG GTGTGCGGGG AGATTGGCAG AATCCTTATT TAACCCTGGA GAAAGAGTAT
GAGGCTGCTC AAATCGGAGT CTTTGGTAAA ATGGCCCGCA AGAAATACAT CTATAAAGGC
TTAAAGCCGG TCTACTGGTG TCCTTCTTGT GAAACGGCTT TGGCGGAAGC GGAGATCGAG
TATGCTGAGA AGACCTCCCA TGCCATCTAT GTCAAGTTCC CCGTTAAGGA AGGAAAAGGG
GTCCTTACTG ATGAAAACAC TTTTGTCATC ATCTGGACCA CTACCCCTTG GACTTTGCCT
GCCAACCTGG CCATTACCCT GCATGAAGAG TTCAGCTATG TCCAGGTGCA GGTGGAGAAG
GAGCATTGGC TGGTTGCTGA AGGGATGCTG GAGAGCCTGC GTTCCCTTTG GAACCTTGAA
CTCCCCGTGG AAAAGCGTTT CGTAGGCAAA GAGCTGGAAG GTGTTATCTG TAAGCATCCT
TTCATCGAGC GGGATTCTGT ACTCATTCTG GGAGAGCATG TTACCCTGGA AGCAGGAACA
GGCTGTGTTC ATACCGCTCC CGGACATGGG GAAGAAGACT TTAATGTGGG TAAAAAATAT
GGGCTGCCTG TGCTTTGCCC TGTGGATCAT CAAGGGAAGT TTACCGCTGA GGGCGGGGCC
TATGCAGGCA TGAAAGTGGA CAAAGCGAAC CCGGTGATCA TTGAAGATCT TAAGAATCTC
CACGCCTTGG TTCATGAGGA TAAAATAAAG CATAGCTATG CTCATTGCTG GCGTTGCAAT
AACCCCATTA TCTATCGGGC CACAGAGCAA TGGTTTGCTT CCATCGATGG CTTCCGCAAA
GCGGCCCTGG AGGAAATCGA CAAGGTGCAA TGGATTCCTT CCTGGGGCAA GGACCGTATT
TATAACATGA TAGCTGATCG GGGAGACTGG TGCATTTCCC GGCAACGGAC CTGGGGGGTT
CCCATTCCCA TTTTCTACTG TGAGGATTGC GGGAAAGAGA TCATTAGCGA TGAGACCATT
GCCAAGGTTC AGGAGATCTT CCGTGAGGAA GGGTCTGACG CCTGGTTTCT CCGTCCCGCC
GCCGAACTTT TGCCGGAAGG ATTCACCTGT GCCTGCGGTG GTAAGTCTTT CCGCAAAGAG
ACAGATATCA TGGATGTTTG GTTCGACTCC GGAACCAGCC ATACCAGCGT CTTGATGGAA
CGGAAGGAGC TCGCCTGGCC CGCCGACCTC TATATGGAAG GATCGGACCA ACACCGGGGC
TGGTTTAACT CCTCCTTGTC CACATCGGTA GCCGCTTATG GAAAAGCTCC TTATAAGGCA
GTTCTGACTC ATGGTTTCCT GGTGGACGAA AAAGGACGCA AAATGTCTAA GTCCCTGGGC
AATGGAGTGG ACCCCCTGCA GGTAACGAAG GAGATGGGGG CGGATATCTT AAGACTCTGG
GTGTGCGCCG CCGATTATAA GAACGATGTG GCGGTATCAC CGCGGATTAT GAAGCAAATG
TCCGAAGCCT ATCGCAAGAT CCGCAACACC TTAAGATTCC TGCTGAGCAA TCTCAATGAT
TTTGATCCGG CCAAGGACCG GGTGGCTTAC AAGGATTTGC CGGAGATTGA CCGTTGGGCT
CTGCTGCAGC TGGGCAAAGT GACTCAGCGG GTATTGCAGG GGTACGAGAA GTACGAATTC
CACTGGGTTT ATCATTCGGT GCATAACTTC TGCGCTGTGG AACTAAGCGC CATTTACCTG
GATATCGTGA AAGATCGGCT TTATGTGGAA GGAAAGAATT CCACTCTGCG CCGCGCCTCT
CAGACCGTGC TCTACGATGT TCTCAATGCC CTGGTACGCT TGATGGCGCC GGTGCTGACC
TATACGGCGG ATGAGATTTG GCCTTATGTC CCAGGGGTGC CCGCTGGTTC CCATGTCCAA
ACTGAGGAAA TGCCCGAGGC CCTTCCGCAA TGGCTGGATG AAGCGCTGGA GAAAAAATGG
GATACTCTGT TGGCGGTCCG CTCCGAGGTA ACAAAAGCCT TGGAAAAAGC CCGTCAGGAT
AAATTGATCA ACCATCCTTT GACAGCTCAG GTAGACCTGT ATCCCAATGC TGAGCTGGAA
GGATTCTTAA GAGGTATTCC CAATCTGTCG GAAATCTTCA TCGTCTCGGC AGTTCAGCTC
CATAGTGCAG GCGAAGAGAA GCCTGAGGGC CTGAGCATGG CAGAAGACCT GGCTGGTTTC
GGTATAGCCG TGAACTCGGC GGCAGGAGAA AAATGCGAGC GCTGCTGGAT TTACGATACA
GGAGTTGGGG AGAATCAGGA GCATCCCACC CTCTGCCCCC GCTGTGCCTC TGTTGTAAGC
CATCTCTAA
|
|---|
| Protein sequence | MDYRNTLNLP ETDFPMRGNL PQREPEILQK WEEEDIYATV QKARAGRPKF VLHDGPPYAN
GDIHLGHALN KVIKDIIVKY KTMAGFDAPY VPGWDTHGLP IEQQVIKKLG VNRHAVSVVE
FRRMCKEYAK KYISIQKEQF KRLGVRGDWQ NPYLTLEKEY EAAQIGVFGK MARKKYIYKG
LKPVYWCPSC ETALAEAEIE YAEKTSHAIY VKFPVKEGKG VLTDENTFVI IWTTTPWTLP
ANLAITLHEE FSYVQVQVEK EHWLVAEGML ESLRSLWNLE LPVEKRFVGK ELEGVICKHP
FIERDSVLIL GEHVTLEAGT GCVHTAPGHG EEDFNVGKKY GLPVLCPVDH QGKFTAEGGA
YAGMKVDKAN PVIIEDLKNL HALVHEDKIK HSYAHCWRCN NPIIYRATEQ WFASIDGFRK
AALEEIDKVQ WIPSWGKDRI YNMIADRGDW CISRQRTWGV PIPIFYCEDC GKEIISDETI
AKVQEIFREE GSDAWFLRPA AELLPEGFTC ACGGKSFRKE TDIMDVWFDS GTSHTSVLME
RKELAWPADL YMEGSDQHRG WFNSSLSTSV AAYGKAPYKA VLTHGFLVDE KGRKMSKSLG
NGVDPLQVTK EMGADILRLW VCAADYKNDV AVSPRIMKQM SEAYRKIRNT LRFLLSNLND
FDPAKDRVAY KDLPEIDRWA LLQLGKVTQR VLQGYEKYEF HWVYHSVHNF CAVELSAIYL
DIVKDRLYVE GKNSTLRRAS QTVLYDVLNA LVRLMAPVLT YTADEIWPYV PGVPAGSHVQ
TEEMPEALPQ WLDEALEKKW DTLLAVRSEV TKALEKARQD KLINHPLTAQ VDLYPNAELE
GFLRGIPNLS EIFIVSAVQL HSAGEEKPEG LSMAEDLAGF GIAVNSAAGE KCERCWIYDT
GVGENQEHPT LCPRCASVVS HL
|
|---|
| |