| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4009 |
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| Symbol | |
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| ID | 7261029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4256074 |
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| End bp | 4258107 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 643563927 |
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| Product | putative ATP-dependent helicase |
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| Protein accession | YP_002460455 |
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| Protein GI | 219670020 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3972] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00213516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA ATTACTTTTA TTCACAGGTA GAAATAAATG AAGAGAATGC TTTATTAATT
GAAGCACTTA GAACATTCGC CAATGATAAC TCCATTCAAA CGTATGCTAT TCTAGAACCA
CTCGGCGAGG AAAAGTATAA TTATGATTAT AAGAATGTAG TTAATGTTCT TATTCCCGGC
TATAAAATAC TTATTGTCAA TGTTGGTAAA AGTAACGACG AAAAATTCGA ATACTTTTGC
GAAGATTTTA TTGAAGATTT AAGTCACCTT TCTGACAAGT TTACATATAA GGACAAAATT
GGTAGGCCGA GGGATTGGAA GCGTAACCAA ATAGAGTTAA TAAACTATGA AAACTTCGAT
GCCGAGGATT TCATAGAAAA GATTAATATT TATAAACTAT CAAATCCAGT TCAAAAGAGA
ATTTCTGAAT TATTAATTTC TTTATTAATT GGAAGTATTA ACCCAATTGT AAATATCGGA
ATAGATGAAC CTGAAAATAT TTTGGATAAA GTTAAACAAA AGATAGTTTT ATTTGATAGT
GATCAAACAC GTTTCATCTT TGAAAAAGTT AATGAACGAA GGATTGTTAT TCAAGGATTA
GCTGGTACGG GTAAAACAGA GTTGTTATTG CATAAACTAA AAGAATTATA TGTTAGGGAA
AGCAAGTCAA AAATTTCATT TACTTGTCAT AGTAAAACTT TATCTAGCAA CCTAAGAATG
CGAGTACCTC AATTCTTCAC ATTTATGAGG GTAGAGGAAC AAATTCAATG GAATGAGAGA
TTATGGGTTC ACGGAAGTTG GGGATCTCAA AACTATCCCC ATTCTGGGCT TTATGCGCTT
ATCTGTAATA GATATGGTAT ACCATTTCAA CGTTATTCTA GAGGAAAGAC ATTTGCCGGA
ATTTGCGCAG ATGCAGTAAA ATTCTTGAAG CAAAGAAAAG TAAATGGAGA TCTCGAACCG
TATTTTGATT ACATACTAAT TGATGAAAGC CAAGACTTTA CTGAAGAGTT TTTTGAATTG
TGCGAAATGG TAACAAAAAA GGCTGTTTAT ATAGCTGGGG ATATATTTCA AAATATATTT
GATAATGATT ATTCAAAGGT GGATCCTGAT TTTCTTCTGA ACAAATGCTA TAGAACTGAT
CCTAGAACAT TGATGTTCTC ACATGCAATA GGGTTAGCTC TATTTGAAAG GCCAGTAGTT
AATTGGTTAA GTGATAGAGA GTGGGAGGCA TGTGGATATC AGATAAGAAA GAACAATGAT
AATTATAGAT TAACTCGAGA AAAAATAAGA CGATTTGAGG ATATAGAAGA TATGCAAGAA
ATAAAGCCTG TTGAACTATA TTGTGTAGAA TATGACAATA TCTTAAATAA AATTATAAGT
TTAATAGGTG AGATTAAAGC AAAACATTCT ACAGTTAAGC CTGATGATAT TGCAATTGTT
TTTGTCGATG ATAGTAATAG CATTTACAGA ATGATTGATG TTTTGGGCGT ATTAATTAGA
AATGAATTTA ACTGGGAGAT AAATAGAGGT TATGACAATA AAGGACAGAT TGAGGATACC
TTATTTATAA GTAATAGAAA TAATATTAAA GGATTAGAAT TCCCTTTCTT AATATGTGTT
GTAACTAATG AGATTGAAAA AAATATTAAG TCTAGAAATA CTCTTTATAT GACTTTAACC
AGGTCATTTA TCTCATCTTA TTTAGTTATG TCTACTTATA ATTCTGATTT GTTCGAAATT
TGGAATCCAC AATTAGAAGG GATTATTAAA GATAATAGTT TATCTATAGT TAGACCTGAA
CCTGAAGATA TAATGTCTAA GGAACAATTA CAAATTAATG ATCCAACATA TAAAACTTAT
CAAGAAATTG TGGAAGAACT GTTCTTAGAG TTTAAAATCC CTATTAAAAA GAGAGAGAAA
ATGCTAAAGA TTTTAGATGC ATATGCAACA GATGATTCTG AAATTTTAGA AGAAGGATTA
ATAAGAATGA TTATAGAGAA GAACTTGGAG CTTATAAATG GAAAAGATAA TTGA
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| Protein sequence | MSKNYFYSQV EINEENALLI EALRTFANDN SIQTYAILEP LGEEKYNYDY KNVVNVLIPG
YKILIVNVGK SNDEKFEYFC EDFIEDLSHL SDKFTYKDKI GRPRDWKRNQ IELINYENFD
AEDFIEKINI YKLSNPVQKR ISELLISLLI GSINPIVNIG IDEPENILDK VKQKIVLFDS
DQTRFIFEKV NERRIVIQGL AGTGKTELLL HKLKELYVRE SKSKISFTCH SKTLSSNLRM
RVPQFFTFMR VEEQIQWNER LWVHGSWGSQ NYPHSGLYAL ICNRYGIPFQ RYSRGKTFAG
ICADAVKFLK QRKVNGDLEP YFDYILIDES QDFTEEFFEL CEMVTKKAVY IAGDIFQNIF
DNDYSKVDPD FLLNKCYRTD PRTLMFSHAI GLALFERPVV NWLSDREWEA CGYQIRKNND
NYRLTREKIR RFEDIEDMQE IKPVELYCVE YDNILNKIIS LIGEIKAKHS TVKPDDIAIV
FVDDSNSIYR MIDVLGVLIR NEFNWEINRG YDNKGQIEDT LFISNRNNIK GLEFPFLICV
VTNEIEKNIK SRNTLYMTLT RSFISSYLVM STYNSDLFEI WNPQLEGIIK DNSLSIVRPE
PEDIMSKEQL QINDPTYKTY QEIVEELFLE FKIPIKKREK MLKILDAYAT DDSEILEEGL
IRMIIEKNLE LINGKDN
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