Gene Dhaf_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3905 
Symbol 
ID7260926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4140636 
End bp4143215 
Gene Length2580 bp 
Protein Length859 aa 
Translation table11 
GC content52% 
IMG OID643563828 
Productmolybdopterin oxidoreductase 
Protein accessionYP_002460356 
Protein GI219669921 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTC TTTTCGACAG CATTACCCAT TCTGCAATGA GCCGCCGAAG GTTTATCCAA 
GCAAGTGCTG CCGCTGCAGC CAGCTTATCA CTTGCCGGTT GCGGAAATTC CTTAACAACG
GCCAGCGCTG ATAAAATGAC TGCTCAGGAA GGGAAATGGA TTACAGCCGC CTGCTGGCAT
AACTGCGGCG GACGCTGTCT TAACAAGGCC TATGTGGTGG ACGGTGTGGT TGTGCGCCAG
AAAACCGATG ATACACATCC GGACAGCCCG GATTATTTCC AGCAGAGAGC TTGCCTGAGG
GGACGCGCCC AAAGAAACCA GGTCTTTGGG GCGGATCGTT TGAAATATCC TATGAAGCGC
AAACATTGGG AACCCGGCGG CGGGGATAAA TCACTGCGGG GACGGGATGA GTGGGTACGC
ATTTCCTGGG ATGAGGCCCT GGATTTAGTG GCTGCCGAAC TCAAAAAGGC TAAAGAAACT
TATGGCAACC GCTCCCTTTT CGCCTGTGGA ACTGAAGTAG GCCGGTTGTT GAACCTGTAC
GGCGGACATA TTACCCGCTG GGGCACCACT TCTTACGGCG CCTGGAAATT CACTCCGGGA
AAGATTGGTT ATTCTTTCAA TGCCGGTGAA GAAACCATTA ATGACCGTAT TGATCTGCGG
GGCTGTGAGA CGATTATTCT CCTGGGTTCC AACCCTGCCT GGAGTTCTGC GGGAAGCCCG
TCTTATCATT TCCTGCAAAT GAAGCAGGCA GGAGCTAAAT TTATCGGTAT TGATCCTTTC
TATAATGATA CCTACGCTTT GCTGGAAGCC GATTGGATCC CTACCCGCCC GCAAACCGAT
GTTGCCCTGT TGACCAGTGT GGCTTATACC TTGATTACGG AAGATGATCC GAGCACTAAT
CCTTTAATTG ATTGGGATTT CTTAAAACGA TGTACCATCG GTTTTGATGG GGACAGTATG
CCTGAAGGAG CCGATCCTAA AGAGAATTTT AAAGATTATG TGCTGGGCAC TTATGATGGC
GTCCCCAAAA CCCCTGAATG GGCGGCGGAG ATTTGCGGTG TCGAGCCTAA TACTATCCGC
AGCTTGGCCC GGCAATTCAC AAAGACCAAA AAAGTAGCCT TTCTGGCCGG GTGGGCCAGT
GCCCGCAATC AAAATGTGGA CGGTCTTCCC CAAATGATTA TGACCATCGG CGCCATGACC
GGCCATATCG GCAAGCCTGG CCACTGTACC GGGGTAAGCT GCCATGCCGG TGCGGGCAAC
GGCGGAGATG CTCTGGTCAG TCCCGGCAAA GACGGGCTTC CCGGCGTGAA GAATCCTCTG
GATGATGTCT TTAATGACGC TCATATCTGG CGAAGTATTG TGGACGGTAA ATATGTGTAT
ATGGGACCCG GCGGTCAGGA CCCCGGAGTA GAGCGTGATG TGGATATCCA CGTCATCTAT
CATGCCGGCC GGGCGCTGCT GCAGACAACG GACGGCATGA ATTTAGGGAT TGAAGCCCAT
CGCAAAGTGG ATTTTGTGGT CACCCATGCT CAATTTTTAA CAACCACTGC CAAGTATTCC
GATATTGTTT TGCCTATCAA TACTGAATGG GAGCGGGTAG GGGGATTCCT CACCGGCAAT
CGGGAAATGG CCATTATGTA TTCCCAGGTC ACAGAGTCCC TCTATGAAGC CAAGAGTGAT
CAATGGATTG TCACGGAATT GGCCAAACGC TTAGGCTTTA AGCCGGAGGA GCTTTATCCT
TTTGATGAGA AGCAGCAATT CTTTAATAAA ATCGCCGGTT CTAAGGTGGT TACACCCGAC
GGCAAGGACT TCGAGCCTCT CGTCACTATT ACTGCGGCGG ATATTGCCCA ATGGGGGGTC
CAGGGAACAC CTCAGCAGGG CCGCATCACT TTGCCGGAGC TTCAGGAAAA GGGTATTTAT
CAGGTGGAGC GCTATCCCGG GGATAACTAT GGGTATATCG CCTGTGCGGA TTTTGTCACC
GATCCTGAAA ATAATCCTTT GCCATCGGAA AGCGGTAAAT TTGAGATTTA TTGCCGCAGC
CTGGCTGAGG TTATCAATGG CACCGGCTTC AGCAAGATCA AACCGATTCC CACTCATATC
CCCGCCCCTG ATGGCTATGA ATCCACCTTT AAGGATTGGG GCAACAAGGT TAAAGGGGAT
TATCCTTATC AGGTCCTCAA TCCTCATTAT CTAAGGCGTT CCCACACGGT TTTTGACAAT
GTCCAATGGC TCAGAGAAAC CTGGCCCAAC CCGGTCTTTA TTAATACCAA GGATGCCGAA
TCCAAAGGCA TTATGGATGG GGATACCGTA CTGCTGACCA GCAGACATGG CAAGACCCTG
CGCAGGGCTT GCCTGACCGA ACGCTTCATG CCCGGGGTCA TCGGGCTGCC CCACGGCGCC
TGGGTGGATA TTGATGAGAA GACCGGTATT GATACGGCCG GAGCAGACAA TATTCTTTGC
GGCTCTGTTC CCACCGGTCA AGGGGTTTCC GGCTGGAACA CCTGTGCCGT CAACATGGAA
AAGTATGCCG GCGCCCCCCT TATCCCGGAT ATAGAAAAAC CCCAACGAAT TTTCTTTTAG
 
Protein sequence
MASLFDSITH SAMSRRRFIQ ASAAAAASLS LAGCGNSLTT ASADKMTAQE GKWITAACWH 
NCGGRCLNKA YVVDGVVVRQ KTDDTHPDSP DYFQQRACLR GRAQRNQVFG ADRLKYPMKR
KHWEPGGGDK SLRGRDEWVR ISWDEALDLV AAELKKAKET YGNRSLFACG TEVGRLLNLY
GGHITRWGTT SYGAWKFTPG KIGYSFNAGE ETINDRIDLR GCETIILLGS NPAWSSAGSP
SYHFLQMKQA GAKFIGIDPF YNDTYALLEA DWIPTRPQTD VALLTSVAYT LITEDDPSTN
PLIDWDFLKR CTIGFDGDSM PEGADPKENF KDYVLGTYDG VPKTPEWAAE ICGVEPNTIR
SLARQFTKTK KVAFLAGWAS ARNQNVDGLP QMIMTIGAMT GHIGKPGHCT GVSCHAGAGN
GGDALVSPGK DGLPGVKNPL DDVFNDAHIW RSIVDGKYVY MGPGGQDPGV ERDVDIHVIY
HAGRALLQTT DGMNLGIEAH RKVDFVVTHA QFLTTTAKYS DIVLPINTEW ERVGGFLTGN
REMAIMYSQV TESLYEAKSD QWIVTELAKR LGFKPEELYP FDEKQQFFNK IAGSKVVTPD
GKDFEPLVTI TAADIAQWGV QGTPQQGRIT LPELQEKGIY QVERYPGDNY GYIACADFVT
DPENNPLPSE SGKFEIYCRS LAEVINGTGF SKIKPIPTHI PAPDGYESTF KDWGNKVKGD
YPYQVLNPHY LRRSHTVFDN VQWLRETWPN PVFINTKDAE SKGIMDGDTV LLTSRHGKTL
RRACLTERFM PGVIGLPHGA WVDIDEKTGI DTAGADNILC GSVPTGQGVS GWNTCAVNME
KYAGAPLIPD IEKPQRIFF