Gene Dhaf_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3870 
Symbol 
ID7260891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4109276 
End bp4110190 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID643563794 
ProductABC transporter related 
Protein accessionYP_002460322 
Protein GI219669887 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATA TTATCAAAAC ACAGGGTCTG TGTAAGCACT ATGGCAAGAC GCCGGGAGTC 
AGTGATTTGG ATCTGTCGGT TGCCGAGGGA GCCGTCTACG GTTTTCTTGG TCCCAATGGC
GCCGGCAAAT CGACAACACT CAAAATGATT CTGGGGCTGG TTAAGCCCAC TGCCGGCAGC
ATTACGGTAT TCGGCAAAAC CATGAATCAC CGCAGCCGCA TGTCCATTCT CAAGGATGTG
GGCTCTTTAA TCGAGTCCCC CAGCTATTAT GGCCATTTAA GCGGCTACGA AAATCTCCGG
ATTATTGCCA CCCTTAAAGG TACTCCGGAA AAAGACATCG GCCGAGTTCT GGAGATTGTC
CGGCTGGAAA ACCAAAAAAA CAAAAAGACA AATCAATATT CTTTGGGCAT GAAGCAGCGT
TTGGGGCTGG CCTGCGCCCT TTTGGGCAAT CCCCGGCTTT TAATTCTGGA TGAACCTACC
AATGGGCTTG ATCCCGCCGG GATTCAGGAA ATGCGGGAGC TGATCCGTTC CCTGCCCAAG
GAGTACGGGA TCACGGTTCT GGTCTCCAGC CATTTGCTCA GTGAGATTGA GCAAATGGCG
ACCAATCTGG GCATCATCAG CAAGGGCCGG CTTGTTTTTC AAAGCAGCCT AGGGGCCCTG
CACCAAAAAA GCAGCCCCAG CATAGCCATC CGCACTTTGG ATAACCACCG GGCCGCCGCT
GTTCTGAGAG AACAAGGTAT TGCTGTTCAG TGCCAGCAGG ATTACCTGCT CCTCCCAGCC
TTTGCGGATG GGGAATTGTC CCGTTTAACT CTGAACCTGT TTGAACAGAA GGTAGGGGTC
GTGCGGATTG AGCAGCGCGA AAAAAGCCTG GAAGATATCT TCCTAGAACT GACGGGATCG
GCGGTGAGTT TATGA
 
Protein sequence
MADIIKTQGL CKHYGKTPGV SDLDLSVAEG AVYGFLGPNG AGKSTTLKMI LGLVKPTAGS 
ITVFGKTMNH RSRMSILKDV GSLIESPSYY GHLSGYENLR IIATLKGTPE KDIGRVLEIV
RLENQKNKKT NQYSLGMKQR LGLACALLGN PRLLILDEPT NGLDPAGIQE MRELIRSLPK
EYGITVLVSS HLLSEIEQMA TNLGIISKGR LVFQSSLGAL HQKSSPSIAI RTLDNHRAAA
VLREQGIAVQ CQQDYLLLPA FADGELSRLT LNLFEQKVGV VRIEQREKSL EDIFLELTGS
AVSL