Gene Dhaf_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3852 
Symbol 
ID7260873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4091753 
End bp4092715 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content56% 
IMG OID643563776 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002460304 
Protein GI219669869 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTCG TTTTCATGGG AACGCCGGAC TTCGCCGTTC CAACTCTCCA AGCCCTGGCG 
GCTCACGGTC ACGATGTGGC GGGAGTGTTT ACCCAGCCGG ACCGCCCTTC CGGCCGGGGC
AAGAACCTGA AGCCCAGTCC GGTTAAGACA GCCGCTCAGG AGCTGGGGCT GCCCGTTTAT
CAGCCCCCCA AAGTCAAAAG CCCCGAGAGC CTGGAAATCT TAAAGGAACT GGCCCCGGAG
GTCATCATCG TGGTGGCCTA TGGACAACTA TTATCCAAAG AAATCTTAGG ATTGCCCCCT
TACGGCTGCA TCAATGTCCA TGCTTCCCTT TTGCCGGATT GGCGCGGCGC CGCTCCCATT
CATTGGTCCA TCCTGAAGGG AGATCAAAGG ACCGGCGTGA CCACCATGCA GATGGATGAA
GGGCTGGATA CGGGAGATAT GCTTCTGAAA ACCGAACTCC CGATTGGGGA GGATACCACC
ACCGGGGAGC TTCATGATGC TCTGGCCCAA GCTGGCGCTC AGCTTTTAAT CGCTACTTTG
GAGCAGCTTC ACAAGGGGAA ATTGCCCAGG ACACCCCAAA AGGGGCCGGT GCGTTATGCC
TCTTTGCTGA CCCGGGAGCA TGAGAAGATC GACTGGGCAC GCAGCGCCCA AGACATTCAT
AATCAGATCC GCGGCCTGAA TCCCTGGCCC GGTTCCTATA TTCTGTTCAG AGAAGAAACG
GTCAAAGTGT GGAAATCAAG CATCTCTGCG CAAGCAAGAG GAGATGGAGC AGAACCGGGC
CTGCCTGCCC TTAAAGATTT TAAGCCAGGT GAAATCATCG CTTGGGATCA GCAGGGCTTG
TTGGTTCAGA CCGGAGAAGG GTTGATCCGG ATTGTTGAGG TACAGCCTGC AGGTAAGAAG
CCCATGCCGG CCCGGGACTT TTTCTTAGGT CGTCGTGGAC AGGCGGGAGA GAGCTTTGGG
TGA
 
Protein sequence
MRLVFMGTPD FAVPTLQALA AHGHDVAGVF TQPDRPSGRG KNLKPSPVKT AAQELGLPVY 
QPPKVKSPES LEILKELAPE VIIVVAYGQL LSKEILGLPP YGCINVHASL LPDWRGAAPI
HWSILKGDQR TGVTTMQMDE GLDTGDMLLK TELPIGEDTT TGELHDALAQ AGAQLLIATL
EQLHKGKLPR TPQKGPVRYA SLLTREHEKI DWARSAQDIH NQIRGLNPWP GSYILFREET
VKVWKSSISA QARGDGAEPG LPALKDFKPG EIIAWDQQGL LVQTGEGLIR IVEVQPAGKK
PMPARDFFLG RRGQAGESFG