Gene Dhaf_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3820 
Symbol 
ID7260841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4059558 
End bp4060553 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content56% 
IMG OID643563744 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_002460272 
Protein GI219669837 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00332973 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGTG TTGGAATCGT GGGCACAGGT TCCTATGTAC CCGATAAGGT TTTGACGAAT 
TTTGATCTGG AGCAGATGGT GGACACCAAT GATCAATGGA TAGTGAGCAG GACGGGGATT
AAGGAACGGC ACATCGCAGC TCCTGAGACT CCGGTATCCG AGCTTTGCTA CCAGGCGGCT
TTGCGGGCCT TAGAAGATGC CAAACTCGCT CCGGAAGAGC TGGATTTAGT GATTGTCGCC
ACCATAACCC CTGATTTTGT TTTTCCGGCC ACAGCTTGCC TGGTGGCGGA ACGCCTGGGA
GCCAAAAAGG CGGCCGGTTT TGACCTGCAG GCCGCCTGCA CGGGATTTTT ATACGGAGTA
GCCACTGCGG CTCAATTCAT CGCTACCGGT ATCTATAAAA ATGCCCTGGT GATTGGCGGG
GAAACCTTAA GCAAGATCTT AAACTGGGAA GACCGGGGGA CCTGCATCCT GTTTGGAGAC
GGCGCCGGTG CGGCAGTTCT GCAGCCGGTG GAAGAGGGGT ACGGATTCCT GGGCTATGAC
CTGGGTATGG ATGGTGCGGG GGGCAGCCTT TTGACCATGC CGGGAGGGGG CTCCATGCAC
CCTGCTTCCG CAGAAACCGT GGCCAAGAAA ATGCACACCA TCCAGATGGC CGGCAGTGAA
GTGTTCAAAT TCGCCGTCCG CATTATGGGG GAGACCGCCT TAAAAGCGCT GGACAAGGCA
GGTTTAGGGA TCGGAGATGT GGATTGCCTT ATTCCCCATC AGGCCAACAC CCGCATTGTG
GATGCGGCAG TCAAACGGCT GGGGATTGAT GCCGGGAAAG TCGTGGTCAA TCTGGACCGC
TATGGGAATA TGTCGGCGGC TTCCATCCCG GTGGCCCTGG ATGAAGCAGC ACGGAGCGGA
CGTTTAAACT ATGGAGACAT TATGGTGATG GTGGGCTTTG GCGGAGGCTT AACCTGGGGA
GCCGCTGTTG TGAAGTGGTC CAAGAGAGGG GTTTAG
 
Protein sequence
MVSVGIVGTG SYVPDKVLTN FDLEQMVDTN DQWIVSRTGI KERHIAAPET PVSELCYQAA 
LRALEDAKLA PEELDLVIVA TITPDFVFPA TACLVAERLG AKKAAGFDLQ AACTGFLYGV
ATAAQFIATG IYKNALVIGG ETLSKILNWE DRGTCILFGD GAGAAVLQPV EEGYGFLGYD
LGMDGAGGSL LTMPGGGSMH PASAETVAKK MHTIQMAGSE VFKFAVRIMG ETALKALDKA
GLGIGDVDCL IPHQANTRIV DAAVKRLGID AGKVVVNLDR YGNMSAASIP VALDEAARSG
RLNYGDIMVM VGFGGGLTWG AAVVKWSKRG V