Gene Dhaf_3761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3761 
Symbol 
ID7260782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3995505 
End bp3996866 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content51% 
IMG OID643563685 
Productsignal recognition particle protein 
Protein accessionYP_002460213 
Protein GI219669778 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000277324 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAG GTCTAAGTGA AAAATTACAA GAAACATTCA AGCGGTTAAA GAGCAAAGGC 
AAGCTCACTG AGGCGGATGT CAATGAAGCG ATGCGGGAAG TCCGTATGGC CTTATTGGAA
GCTGATGTGA ACTTTAAGGT GGTTAAGGAT TTTGTCGCCA AAGTCAAGGA ACGTTCCATT
GGACAGGAGG TTCTCGAATC TCTTTCCCCT GGACAGCAGG TGATCAAAAT TGTTAATGAG
GAAATGGTCG CCTTAATGGG CGGCGTTTCC AGCAAGATAA ATATTTCCTC GAAGCCTCCT
ACAGTCATTA TGCTGGTGGG CTTGCAAGGA GCCGGTAAGA CAACCCATGG TGCCAAGCTG
GCTAATATGC TGAAGAAGCA AGGCAAACAT CCCCTCTTGG TCGCCTGCGA TATTTATCGT
CCGGCAGCCA TCAAACAGCT GGAAGTCCTC GGTGAACAGA TCAAGGTGCC TGTGTTTTCC
TTAGGCCAGG AAAACCCGGT AAAGATCGCC GCCGCCAGCC TTCAGCATGC CAACAGCCAG
GGCCTGGATG TGGTCATCAT CGATACGGCA GGCCGCCTGC ATATCAATGA AGAGCTTATG
GGAGAACTCC GAGAGATTAA GACCGCAGTG AAGCCCCATG AAATCCTGCT GGTGGTGGAT
GCCATGACCG GGCAGGATGC TGTGAATGTA GCGGAAAGCT TCCATAACGA GCTGGGGGTT
GATGGCATCA TCCTGACCAA GCTGGATGGA GATACCCGGG GCGGGGCTGC CCTCTCCGTG
AAGGCCGTAA CCGGCTGCCC TATTAAATTT GCCGGTGTCG GGGAAAAGAT GGATGCTATT
GAGCCCTTTT TCCCGGAACG GATGGCCTCC CGTATTTTGG GAATGGGGGA TGTCCTGACC
CTGATCGAAA AGGCCCAGGA AGCCTTTGAC GAGAAGCAGG CCCGGGAAAT GGAGCAGAAG
CTGCGCAAGC AGGAATTTAC CCTGGATGAT TTCCTGGATC AGATGCAGCA GCTTAAAAAG
ATGGGGCCCT TAAATTCTCT GCTGGAAATG ATCCCCGGCG TTGGCAAGCA GATGAAGGAT
GTCCAGGTCG ATGAAAAAGA TATGGCCCAT GTGGAAGCCA TTATTCATTC CATGACTGCC
GAAGAGCGCA GAAAGCCCGC CTTGATCAAG GATTCCAGAA AGCGTCGCAT CGCCAAAGGC
AGCGGGACCA GCGTTCAGGA GGTAGGGCGT TTGCTGAAGC AGTTCGAGCA GATGCAAAAG
ATGATGAAAC AGTTTGCCGG CGGTTCAGGT ATGGGGATGA TGGGCAAGGG CAAAAAGGGT
AAAAAAGGGA AGAAATTAGG TTTGCCTTTC CCTTTCAAAT AA
 
Protein sequence
MFQGLSEKLQ ETFKRLKSKG KLTEADVNEA MREVRMALLE ADVNFKVVKD FVAKVKERSI 
GQEVLESLSP GQQVIKIVNE EMVALMGGVS SKINISSKPP TVIMLVGLQG AGKTTHGAKL
ANMLKKQGKH PLLVACDIYR PAAIKQLEVL GEQIKVPVFS LGQENPVKIA AASLQHANSQ
GLDVVIIDTA GRLHINEELM GELREIKTAV KPHEILLVVD AMTGQDAVNV AESFHNELGV
DGIILTKLDG DTRGGAALSV KAVTGCPIKF AGVGEKMDAI EPFFPERMAS RILGMGDVLT
LIEKAQEAFD EKQAREMEQK LRKQEFTLDD FLDQMQQLKK MGPLNSLLEM IPGVGKQMKD
VQVDEKDMAH VEAIIHSMTA EERRKPALIK DSRKRRIAKG SGTSVQEVGR LLKQFEQMQK
MMKQFAGGSG MGMMGKGKKG KKGKKLGLPF PFK