| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3711 |
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| Symbol | |
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| ID | 7260732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3942031 |
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| End bp | 3942819 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643563635 |
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| Product | transcriptional repressor CodY |
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| Protein accession | YP_002460163 |
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| Protein GI | 219669728 |
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| COG category | [K] Transcription |
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| COG ID | [COG4465] Pleiotropic transcriptional repressor |
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| TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.207426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACT TATTGGAAAA AACAAGAGCG ATTAGTAAAT TAATTCAAAA AGCTGCCGGC
CATTCCGTAG ATTTTGACGA AATGGCCAAT GTGCTCAGTG AATCTATTCA GTCCAATTGC
TATATTGTAG GACGTCGCGG TAAAATTTTA GGCTATAGCT TTATGCAGAA TTTTGGCTGC
AACACCATGG AAGACATCGT CGTTCATACC GAGCGGTTCC CGGAAAGCTA TAATGAAGGA
TTATTAAAGG TCACAGAAAC CCGCTCCAAT ACCACTCAGG TAGCCAATGG CTGCGTTTTT
AACGAAAAAG AGCGTTGCCA TTTCAATAAT AAAATCACGA CGATTCTTCC GATTCTCGGC
GGCGGCGAAC GGGTAGGGAC TTTGGTATTG GCAAAATTCG ATCAGGATTT CAGTGAAGCA
GACTTAATTC TTGCTGAATA CGGAGCGACT GTAGTCGGTA TGGAAATTCT GCGCATCAAA
GCTGAGCGGG CGGAAGAAGA AGCGCGCAAG AAAGCGGCTG TTCAAATCGC TGTAGGTACT
TTATCTTATT CCGAATTGGA AGCGGTGGAG CATATCTTTG CTGAATTGGG CGGCGGCGAC
GGCTTGCTGG TGGCCAGCAA GATCGCCGAC CGGGTGGGAA TTACCCGTTC CGTCATTGTC
AACGCCTTAA GAAAATTTGA ATCCGCCGGA GTGATTGAAT CCAAATCCTT AGGGATGAAA
GGAACCTACA TCCGCGTCTT AAATGATTAT CTCCTCGAAG AGTTGGACAA AATCAGCCAC
AACAAGTAA
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| Protein sequence | MKNLLEKTRA ISKLIQKAAG HSVDFDEMAN VLSESIQSNC YIVGRRGKIL GYSFMQNFGC
NTMEDIVVHT ERFPESYNEG LLKVTETRSN TTQVANGCVF NEKERCHFNN KITTILPILG
GGERVGTLVL AKFDQDFSEA DLILAEYGAT VVGMEILRIK AERAEEEARK KAAVQIAVGT
LSYSELEAVE HIFAELGGGD GLLVASKIAD RVGITRSVIV NALRKFESAG VIESKSLGMK
GTYIRVLNDY LLEELDKISH NK
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