Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3702 |
Symbol | |
ID | 7260723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3934553 |
End bp | 3935698 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643563626 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_002460154 |
Protein GI | 219669719 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000227105 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAGAT TGACAATTTT AGGCTCTACG GGGTCTATCG GCACCCAGAC ATTGGATATT GTGCGTCAAA ATCCGGAACA GTTAGAGGTT TTTGCTTTAG CGGCAGGGAA GAATGTCCAG GAAATTGAAC TTCAGGCCCG GGAATTTAAG CCTCAGATCA TCGGGTTGAT GGAGGAAAAG GCTGCCCGGG AATTAAAACA ACGGGTGGCG GATCTGGATA TTGAAGTGGT TTCCGGGATG GAGGGGCTCC TGCGCACCGT TACGGATGAG GTGCCGGATA CGGTGGTAAC GGCCATCAGC GGGCGCATTG GTTTGGAGCC GACCATGGAG GCCTTGAAGG CGGGAAAAGA CATCGCCTTA GCCAATAAGG AAACCTTGGT TGCCGGCGGC GATTTGGTGA TGGGAACAGC CCAAAGGCTG GGCAGAACCA TTCTTCCCGT GGATAGTGAA CACTCGGCCA TCTTCCAATG CTTAGAAGAA GATCCGCGTA CCCTGGACAA GATCATCCTG ACGGCTTCCG GCGGTCCATT CCGGGGGTGG TCTGAAGAAC AATTGAGGGA GGTCACTCCG GAAAGAGCTC TGCAGCATCC TAATTGGGCG ATGGGAGCAA AGATAACCAT TGACTCCGCC ACCATGATGA ATAAAGGCCT GGAAGTTATT GAGGCTCATC ACCTCTTCAA TATGGAGTAT GATCAGATTG ACGTCTTGAT CCATCCGCAA AGTGTGATTC ATTCTATGGT TCAATACTGT GATGGGAGTG TTCTGGCACA ATGTGGAAGA CCGGATATGC GTTTGCCTAT CCAGTATGCC TTAACTTATC CGACCCGCTG GCCTAACCCC TTTGAACGAC TGGATTTACG GGGAAAGACC TTAAGCTTTT TTGACCCGGA GGATTATGAT TTCCCTGCCT TGAAGCTTGC TTACGCTTGT GGAAAACGGG GAGGTACGTT GCCGGCTGTG ATGAATGCCG CCAATGAAGT TGCGGTTCAT GCCTTTTTAG CACGCAGGGT AGCTTATCTG GAAATTATCG GCTTGGTGGA TAAGGTTTGC TCGGAACATG ATGTGTTAGA TGCCACAGAT TTGGAAACCA TACTTAATGC GGATCATTGG GCTCGTATCC GTACGGAAGA GCTTATCCAT AGCTAG
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Protein sequence | MKRLTILGST GSIGTQTLDI VRQNPEQLEV FALAAGKNVQ EIELQAREFK PQIIGLMEEK AARELKQRVA DLDIEVVSGM EGLLRTVTDE VPDTVVTAIS GRIGLEPTME ALKAGKDIAL ANKETLVAGG DLVMGTAQRL GRTILPVDSE HSAIFQCLEE DPRTLDKIIL TASGGPFRGW SEEQLREVTP ERALQHPNWA MGAKITIDSA TMMNKGLEVI EAHHLFNMEY DQIDVLIHPQ SVIHSMVQYC DGSVLAQCGR PDMRLPIQYA LTYPTRWPNP FERLDLRGKT LSFFDPEDYD FPALKLAYAC GKRGGTLPAV MNAANEVAVH AFLARRVAYL EIIGLVDKVC SEHDVLDATD LETILNADHW ARIRTEELIH S
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