Gene Dhaf_3657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3657 
Symbol 
ID7260678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3891674 
End bp3893338 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content46% 
IMG OID643563582 
Productbeta-lactamase domain protein 
Protein accessionYP_002460110 
Protein GI219669675 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000145039 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCAAAAG AACATAAGGT TCAGATCATA CCTTTAGGCG GATTAGGCGA GATCGGTAAA 
AATATGACCG TGATTCGTTA CGATAATCAA ATGATCGTTA TAGATGCGGG ATTGGCATTT
CCCGAAGATG AGATGCTGGG GATAGACATA GTTATACCAG ATTATTCTTA TCTGCTGGAG
CATAAGGACA TGGTTCAAGG GATTCTAGTC ACCCATGGTC ATGAAGACCA TATTGGTGCA
CTGCCTTATC TCCTCAAAGA CTTGGATGCT CCTATTTTTG CTACACGATT AACCTTAGGA
CTCATTCAAT CCAAATTAAA AGAAGGAAAT CTCGATAATA TCAAGGCCAC GGTGGTCCGT
CCCAGAGATA CGGTTAAACT TGGAGTTTTT AAAGTTGAGT TCCTGAGTGT GAATCACAGT
ATTCCAGATG CAGTGGCACT GGCGATCCAT ACTCCTCTAG GTACTATTGT TCATACTGGG
GATTTCAAAG TGGATCATAC TCCTGTCATG GGTGAAAAGA TTGATATTCA TAAGTTCGCT
GAACTGGGCG ATAAAGGGGT CCTTTGCCTG ATGTCCGACA GTACGAATGT GGAACGGCCT
GGTTTTACCA TGTCTGAACG CAGCGTGGGA CACATGTTCG AGGAAGCATT TAATAGTGCC
AAAGACAGAA TCATCATTGC CAGCTTTGCA ACCAATGTCC ACAGACTTCA GCAAGTGATT
ACGGCAGCGC ACCATACTAA CCGCAAGGTT GCTGTGGTCG GCCGGAGTAT GGTCAACACA
GTAGCCATAG CCTCTGAGTT AGGGTATTTG GATATACCGG AGGATACTTT GGTTGATGTG
GATGAAGTGG TGAACTTGCC GGGCAATCAA GCTTGTATTC TAACGACAGG CAGTCAGGGT
GAGCCCATGT CGGCTCTGAC CCGGATGGCT ATGAGCGATC ACCGGCGTAT TGAAATTCAG
CCCGGCGATA CAGTGATCAT ATCTGCCAAT CCTATCCCCG GTAATGAAAA ATCAGTATCA
AAAACCATCG ACCTCTTGTT TAAGCTCGGT GCCAATGTGA TCTATGAATC TTACCAGGGT
ATGCACGTTT CCGGGCACGC CAGCCAGGAA GAGCTTAAGC TCATGCTTAA TATGATTCGT
CCTCAGTATT TCATTCCTGT TCATGGTGAG TACCGTATGC TTATTAAGCA TGCTAAACTG
GCCGAGCAAA TGGGAATTTC CAGAGAGAAC ACGTTTGTTG CTGATAATGG CACAATTGTT
GAGTTCACTC GCCATGGAGC GAGTATAGCG GGAAAAGTTC CCGCTGGGAA AGTGCTGATT
GATGGACTTG GTGTTGGCGA TGTCGGCAAT ATTGTTCTAA GAGATCGGAA ACAACTCTCT
CAAGATGGCA TTTTAATCGT GGTTATGACG ATTAGCCGCA GCTCCGGCGC TATTGTGGCA
GGCCCTGATG TAGTAACACG TGGCTTTGTC TATGTACGGG AATCGGAATC CATGCTAGAA
GAAGCAAAAG ATAAAGTAAG ACAAACCATG AACCGCCTCA GGGAGAATCA TGTTACAGAA
TGGGCTGTAC TAAAGGGACA AGTTCGAGAA ACCTTAAGCA AGCATTTCTA TGAGAAAACC
CGGAGGCGCC CCATGATTCT GCCGATTATT CAGGAAGTAG AATAA
 
Protein sequence
MPKEHKVQII PLGGLGEIGK NMTVIRYDNQ MIVIDAGLAF PEDEMLGIDI VIPDYSYLLE 
HKDMVQGILV THGHEDHIGA LPYLLKDLDA PIFATRLTLG LIQSKLKEGN LDNIKATVVR
PRDTVKLGVF KVEFLSVNHS IPDAVALAIH TPLGTIVHTG DFKVDHTPVM GEKIDIHKFA
ELGDKGVLCL MSDSTNVERP GFTMSERSVG HMFEEAFNSA KDRIIIASFA TNVHRLQQVI
TAAHHTNRKV AVVGRSMVNT VAIASELGYL DIPEDTLVDV DEVVNLPGNQ ACILTTGSQG
EPMSALTRMA MSDHRRIEIQ PGDTVIISAN PIPGNEKSVS KTIDLLFKLG ANVIYESYQG
MHVSGHASQE ELKLMLNMIR PQYFIPVHGE YRMLIKHAKL AEQMGISREN TFVADNGTIV
EFTRHGASIA GKVPAGKVLI DGLGVGDVGN IVLRDRKQLS QDGILIVVMT ISRSSGAIVA
GPDVVTRGFV YVRESESMLE EAKDKVRQTM NRLRENHVTE WAVLKGQVRE TLSKHFYEKT
RRRPMILPII QEVE