| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3641 |
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| Symbol | |
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| ID | 7260659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3866234 |
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| End bp | 3867235 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643563563 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_002460094 |
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| Protein GI | 219669659 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000105087 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTAAAAA GAAAAACCCC ATTCATTTAT CTACTATGCC TGTTTCTGCT TTTGCTGGGA
ACACAGGGCT GCAGCACAGT AAAGCAGGGT CAACCGGAAG AAAAGAAGCC TCAGGCATTG
ACTCAGCTTA ACGCATCCTA CTCCACACGG CCCATTAACG TTCCTGCTAT CGTTGCCCTC
GACCAACATA ATTTTGAAAA AGATTTTCAA GGGGAGGGTA TCGATTTTAA ATGGACTGAG
ATTGCAGCGG GGCCGGCACA GCTTGAAGCC CTGGCTTCCA AGAGTATCGA TATAAGCACC
TCTATGAATT ATGTGTCCGC TTTGCTGGCC AAAGCCAATG GTAACGATAT CAAGGTCGTT
GCCGGGTATT CACAATTTCC TAAAGGGATC GCTATCGTTG CTCAAACTGA GCTTAATGTC
AAAACATTAG CTGATCTGAA GGGTAAGAAA ATCGCCCTGC AAAAGGGAAC CATGCTCCAT
GAGTTCTTAA TTAAGGCCCT GAAAAAAGAG AACTTAAGTC CCGGGGATGT GGAAATGGTA
GCGATGGAAT CTGTAGATGC AGCTCCTGCC TTGATGGGCG GACAAATTGA TGCGGCTATT
TTACCTGACC CCCTTCTGAC GAAAGTGGTC AGTTCCGGAA AAGGGACTTT AGTTCTGAAT
GCGGAAGGGC TGATAACCGG TCAAACCTTT ATCGTAGCGA GAGCAGACTT TGCCCTGGAG
CATCCCGAAG CCGTCAAACG CTTTATTCAA CTCCATGAGG AAAGTATTCA CTGGGCCGAG
CAGAACAAAG AGCAGTTTTA CAGTGTTGCC GGTGAACAAC TGAAGCTGGA GCCTAAAGCA
GTGGCGGCAC TTTACCCGAA ATTTATGTTT TCCACGGAAA TTAATTCGGA AATGATTCAT
GAGCTTAAAC TATCGGCACA GTTTCTGCAA GAGAATGGGT TTATCAAGTC TACAATAAAC
ACGGATCAAT TGGTGGATGA TCTGGTGGGG ACGAGCCATT GA
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| Protein sequence | MLKRKTPFIY LLCLFLLLLG TQGCSTVKQG QPEEKKPQAL TQLNASYSTR PINVPAIVAL
DQHNFEKDFQ GEGIDFKWTE IAAGPAQLEA LASKSIDIST SMNYVSALLA KANGNDIKVV
AGYSQFPKGI AIVAQTELNV KTLADLKGKK IALQKGTMLH EFLIKALKKE NLSPGDVEMV
AMESVDAAPA LMGGQIDAAI LPDPLLTKVV SSGKGTLVLN AEGLITGQTF IVARADFALE
HPEAVKRFIQ LHEESIHWAE QNKEQFYSVA GEQLKLEPKA VAALYPKFMF STEINSEMIH
ELKLSAQFLQ ENGFIKSTIN TDQLVDDLVG TSH
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