Gene Dhaf_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3598 
Symbol 
ID7260616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3821377 
End bp3821901 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content42% 
IMG OID643563520 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002460051 
Protein GI219669616 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000155283 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACAAA AGATTATGAA CAGGGTGAAA CAGGCCCAAA ACGGCGATAA AGAAGCCTTG 
ATTCAATTGA TCATGAGTCA GAAGGAGGAC TATTATCGTC TGGCTTATGT TTATATGAAA
AATCAGGAAG ATTCCCTGGA TGCGCTGGAA GATATGATTC TGAAAGTGTT TGAAAATATC
AGGACGCTTA AAGATGCCGA AGCCTTCTTT AACTGGAGCA AAACGATTTT AGTCAATTGC
TGTAAGCAGA ATTTGCGGAA GAAGAACAAA GTTATCCTGC TCCAGGAGCT GCCTGAAGAA
GCCTATGAAG AAGCGTATAG TGTACACGAA GAGCGGATGA CCTTTGAAGC CTATTTAACC
TCATTGAATC CACACTATCA GGAGGTTCTA AGGCTGCGGT TTTTACTGGA TATGGATTAT
CAAACCATCG CCGATCTATT GAAAATCCCT CTGGGTACGG TGAAATCAAG AATGCACACC
GGATTGCAAA AGCTAAAACA AAGGATGGAG GTGGAGCAGG TATGA
 
Protein sequence
MEQKIMNRVK QAQNGDKEAL IQLIMSQKED YYRLAYVYMK NQEDSLDALE DMILKVFENI 
RTLKDAEAFF NWSKTILVNC CKQNLRKKNK VILLQELPEE AYEEAYSVHE ERMTFEAYLT
SLNPHYQEVL RLRFLLDMDY QTIADLLKIP LGTVKSRMHT GLQKLKQRME VEQV