Gene Dhaf_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3550 
Symbol 
ID7260568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3774462 
End bp3775772 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content46% 
IMG OID643563473 
ProductIg domain protein group 2 domain protein 
Protein accessionYP_002460004 
Protein GI219669569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCGG ATGTATTAGG GGGAATAGGG ATGAAGGAAC GGGGGGCGGC TCTGATAACC 
GTCGTTATGG CGATGCTGGT TATTACAATG ATTTCCGGAG TGTTTTTCTT CTTAGTCAGG
TCGAATATGA AACTGGTCAA TTCCGAACAA GGAGCTATTC TGGCCAACAA TCTGGCGGAT
GCAGGTATTC AGTATGGAAT TTCCCTACTT CTGGTTGATG AGATTAAAGC AGGAGATGAG
CCTTTTTCAT TGGAGGATCT CCCTTCACTG GCTAATCCAC CAAGCGATCC ATTGAATAAT
GGGGGGGATT TTGATATTTG GTGGGAAAAT GGCTCTGAAG CAAACTCATT TATAATCTTC
AGCAGGGGGA GCTATGGTAA AATTACGAGG ACAAAAACCG CCGGGTTTAC CATAGGAACC
GAAGGTGTTG GCGGAGGCGA AGGATCGGGC GGGCCTGGGG GAGGAGAGCC GGCTTATCCC
TATTGGGATT TGAACCATAG ATATATAGAA GGTGATTACG TTGTTTATAG TGTTATGATC
GATGGCAGGA GCGTTGAGAG ATTATATCGT GCTCGTCATA ATGGCTATGT AGGTGAGCTG
CCTGGGGCTC CCTGGACCAC TTGGCAGGAA ATAACCAATC ATTACAGAGT TTCTAATTTT
TATGAACTTA TTAATGGGAA TACGATTATC TATTATGGGT CCACTTATTG GCAAGCAAGG
TGGAATGGAC ATGGGACCGG AAATGAACCC GGTAAAAATA CAGAGCGTTC CAGCGGTATG
TGGCGTGAGC TGATCGATGA ATGGCGCCCG TACGAAGCTT ATCCGGAGAA AGAAGTTGTC
AGCTATAACG GAAAACGGTA TCGCGTAAAA TGGAATAACC CGCAGGGTCC TCCTGATGCT
TCCGATCCTA ATGGGCCTTG GGAGCTATTG GAAGATTGTG TCACTCTGCA AAGCGTGGTT
ATTTCACCAT CTTCTATGAT CATAAAGGAG GGTGAAAAGG TTACATTTAG GGCGACAGCC
CTTTTTTCTG ATGGAACCAC AGAAGATGTT ACCAGTAAGG TGATCTGGTC AAGTACATAT
CCTCAAATAG CTTCTATTTC AGGTAATGTT CTCACGGGTG TAATGGATAC CGGAGTTGAG
GGATGTAATG CAACATTGGT TTCTGCTTCA TATACTTATA ACCATCAGGA GAGAAGCGAT
ATTGTTATTA ATCGAGTTGG CGTGACCGAA ATAAAAGTAT CTGAATCTCA TGAAGGGGAC
GAGGATTCAG GGCTGATTAT CTGGGAGCGG GAGGTCCTTT CCGGCCCCTA A
 
Protein sequence
MDSDVLGGIG MKERGAALIT VVMAMLVITM ISGVFFFLVR SNMKLVNSEQ GAILANNLAD 
AGIQYGISLL LVDEIKAGDE PFSLEDLPSL ANPPSDPLNN GGDFDIWWEN GSEANSFIIF
SRGSYGKITR TKTAGFTIGT EGVGGGEGSG GPGGGEPAYP YWDLNHRYIE GDYVVYSVMI
DGRSVERLYR ARHNGYVGEL PGAPWTTWQE ITNHYRVSNF YELINGNTII YYGSTYWQAR
WNGHGTGNEP GKNTERSSGM WRELIDEWRP YEAYPEKEVV SYNGKRYRVK WNNPQGPPDA
SDPNGPWELL EDCVTLQSVV ISPSSMIIKE GEKVTFRATA LFSDGTTEDV TSKVIWSSTY
PQIASISGNV LTGVMDTGVE GCNATLVSAS YTYNHQERSD IVINRVGVTE IKVSESHEGD
EDSGLIIWER EVLSGP