Gene Dhaf_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3440 
Symbol 
ID7260458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3674790 
End bp3675137 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content45% 
IMG OID643563363 
Productanti-sigma-factor antagonist 
Protein accessionYP_002459894 
Protein GI219669459 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor
[TIGR02886] anti-sigma F factor antagonist 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTATTG ACAAAAAACT GGAGCGTCAG ACCTTGCTCT TGACCTTAAA GGGAGAACTT 
GACATGAATA CCTCTGAAAG TCTACGCCAG ACCATAGATA GTGAGATTGA ACGTCGTGGA
GTGCGAACAG TCATACTTAA TCTGGAAGAC ATCAGTTTTA TCGACAGTTC GGGGCTGGGG
GTTATTCTTG GGCGTTACAA GAAGCTTCTC CCCATGGGGG GGAAAGTGAT CATCACCCGG
GTACCTCCCC ATATCTATAA GATCATGGAA TTATCCGGTC TCCCACGTAT CATTCAATTC
GAAGATATTC TGAACCAGGA AGATGGAAGG AAGGGAAAAA CTGTATGA
 
Protein sequence
MLIDKKLERQ TLLLTLKGEL DMNTSESLRQ TIDSEIERRG VRTVILNLED ISFIDSSGLG 
VILGRYKKLL PMGGKVIITR VPPHIYKIME LSGLPRIIQF EDILNQEDGR KGKTV