Gene Dhaf_3313 details

Gene Information

• Locus tag: Dhaf_3313
• ID: 7260329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 3549331
• End bp: 3551241
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 643563234
• Product: ABC transporter related
• Protein accession: YP_002459767
• Protein GI: 219669332
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000905191
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGCAT GCAGTGTTAA CAAAGTGACT AAAATGTACG GCGGCAATAC CATTTTTTCG 
AATATATCCC TGGAGATCCA AGAAAATGAG CGGGTCGGCT TGGTCGGCCC TAATGGCAGC 
GGCAAAACCA CCTTATTCAA GCTGCTGGCC GGCCAAGAAG ATCCTGATGC CGGGCAGGTC 
CATTGGAAGA AAGGTTCAAA AACCGGCTAT CTTACGCAAA TCCCGGACTT TGAAGATGGA 
TTAACGGCCA GTGATGTTCT GATGATCGCT TATCGCGAAC TTTTAGAGAT GGAAGAGACG 
ATGAGGGAAC TTGAAACAGC CATGTCTATG GAAGAAGAAC ACCCCAGACT GGACAAACTT 
ATGGAACATT ACGGCCTTCT CCTCAATCAG TTCACACTCC AAGGTGGCTA CGAAATCCAG 
GCTAACCTTG AAAAAATAGC CCAGGGACTC AACATCGGAG ACTTGCTGCC CAGGTCCTTT 
GCTACTCTCA GCGGAGGAGA AAAAACGAAG GTCGGGTTGG CTCTCACTCT TCTTAAAAAC 
CCGGATTTCT TATTATTGGA TGAACCCACC AATCATCTCG ACCTGTTTGC CGTCAAGTGG 
CTGGGCAGCT TCCTGAAAAC TTATAACGGC ACTGTCCTGG TTATCTCTCA TGACCGTTTT 
TTCCTGGATG AAGTCGTGAC GAAGATCCTG GATTTAGCGG ACGGTGAGCT GTACCATTAC 
CATACCAATT ACACGGGCTA TGTGAAAGAA AAAGAAGAAC GCCTTCTTAA GGAATTCCAC 
GATTACGAAG AACAGCAAAA GCAGATCAAG AAGATGAAGG AAACTATCAA GCGTTTGCGG 
GAATGGGCAA ATCGGGCTTA TCCCTCCGGC GAAGGACTCT ACCGGCAGGC CAAGAATATC 
GAAAGGGCCC TGGAGCACAT GGAAAAACTC AGCCGCCCTC AGCTCAACCG CAAGAAAATG 
AATCTGGAGA TGGAGGCTTC AGAGCGCAGC GGTAAAGATG TGGTTCTGCT CCAAGATGTC 
GCCAAGGCCT TCAGCGGCAA TCAACCCCTT TTCACCAACG TCAACCTCCA CCTTGCTTTT 
GGGCAGCGGG CTGCCATCGT CGGTGAAAAC GGCACGGGAA AATCCACTTT AATTAAATTG 
ATCTTAGGGG AACTGAGCCC GGACCAAGGA GAAGTGCGCA TCGGCAGCAA TGTCAAAATT 
GGCTATCTAT CCCAGCAGGT TTTCTCCGAC ACGAAAGAAA AAACAGTGAT CGATCTTTTC 
CGTGAAGACA TCCCCATGAC TGAAGGAGAG GCCAGAAATA CTCTCGCCCG CTTCCTCTTT 
TACGGGCCTA TGGTTTATAA GAAGGTATCT CAGCTGAGCG GCGGGGAGCG GATGCGGCTC 
CGCTTAGCCC AGCTTATGTA TCAGGACAAT AATCTCCTGA TCCTTGATGA ACCCACCAAT 
CATCTGGACA TGGACTCCCT GCAGGTCCTG GAGGATGCCC TGGAAAACTA TGATGGAACC 
CTGCTGGCTG TCTCTCATGA CCGTTACTTT CTCAATAAGC TCTTTCACAA GGTGTATTGG 
CTTGAAGCCG GAGCGGTGCA CTGCTTTGAG GGAAACTTCA GCTATGCGGA AGAGAAGATG 
GGAACCGCCC ACCATCAAAA TGAGAGGGTT CATAACGAGG AAGTACAACT CAAAAGAGAG 
AAACCGACGG TCAAACAAGG CGGGAGTGAC TCCCTCCCGA CCAGGGATAA AATAACTCCG 
GACTATCGCC TCGAAAAACT GGAATCAGAG CTCAAGAACT TGGAGGAGCA GATATCATCC 
CTGGATCTTC AACTCCGGGA GATTGTGGAC CTGGCCCAAT TGCAACAGGT CTATGCAGAG 
AAGGAAGGAT TGGAAAAGCG CTGGCTGGAG ATCTTTGAGC TGCTGGAGTA G 

 

Protein sequence

MIACSVNKVT KMYGGNTIFS NISLEIQENE RVGLVGPNGS GKTTLFKLLA GQEDPDAGQV 
HWKKGSKTGY LTQIPDFEDG LTASDVLMIA YRELLEMEET MRELETAMSM EEEHPRLDKL 
MEHYGLLLNQ FTLQGGYEIQ ANLEKIAQGL NIGDLLPRSF ATLSGGEKTK VGLALTLLKN 
PDFLLLDEPT NHLDLFAVKW LGSFLKTYNG TVLVISHDRF FLDEVVTKIL DLADGELYHY 
HTNYTGYVKE KEERLLKEFH DYEEQQKQIK KMKETIKRLR EWANRAYPSG EGLYRQAKNI 
ERALEHMEKL SRPQLNRKKM NLEMEASERS GKDVVLLQDV AKAFSGNQPL FTNVNLHLAF 
GQRAAIVGEN GTGKSTLIKL ILGELSPDQG EVRIGSNVKI GYLSQQVFSD TKEKTVIDLF 
REDIPMTEGE ARNTLARFLF YGPMVYKKVS QLSGGERMRL RLAQLMYQDN NLLILDEPTN 
HLDMDSLQVL EDALENYDGT LLAVSHDRYF LNKLFHKVYW LEAGAVHCFE GNFSYAEEKM 
GTAHHQNERV HNEEVQLKRE KPTVKQGGSD SLPTRDKITP DYRLEKLESE LKNLEEQISS 
LDLQLREIVD LAQLQQVYAE KEGLEKRWLE IFELLE