Gene Dhaf_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3285 
Symbol 
ID7260301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp3515468 
End bp3516574 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content56% 
IMG OID643563206 
Productnicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_002459739 
Protein GI219669304 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000247472 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGACT TCTTAAGACA GGAAAACCTG AGTGACGCTT CCCTGGAGGA ATGTGAAACC 
GCCTTAGACC ATCTTATCCA GGGAATACAC GGTCTTGACG AACAGGTCAT GGCCGCTGTA 
CAAACCCGTT TAGATTCCTT AACCAAACCC CAAGGCAGTT TAGGAGTCCT GGAAGCCCTC 
GCCAAACAAT TGGGCGGGAT TCAAGGTCAG CCTTGGCCGG AAGTACAAAA AAAGGCCATT 
CTCGTCATGG CCGGAGACCA CGGCGTGGTG GCGGAAGGGG TCAGTGCCTT CCCTCAGGAA 
GTAACCCCGC AAATGTTCTA TAATTTCCTG GGCGGCGGGG CAGGGATCAA TGTCCTGGCC 
CGTCATGCCG GCGCCGAAGT GATCTGCACC GATGTGGGCA TGGCTTTCCC GCTGGATCCG 
CCCGAGCTTA TGGCTCACCG CATCATGAAC GGAACCCATA ACATGGCCCA GGGACCGGCT 
ATGAGCCGTA AAGAAGCTCT GCTCTCCCTG CTGACCGGAG CTAAAATCGC CCGCCAGGCT 
ATCGATTCCG GAGTGAATGT CCTGGCCACA GGGGAAGTGG GCATCGGCAA TACCACCCCC 
AGTACAGCCA TTATTTCTCT CTTGACAGGT TTGCCGCCCC AGGAGGTTAC CGGAAGGGGC 
ACCGGTCTGG ATGATGAAGG ACTCATCCGC AAGCAAAACG TCATCGCCCG TTCTATCGCC 
ATCAATCAGC CCGATCCTAA GGATGGAGTG GATATCCTCA GCAAAATAGG GGGCTTGGAG 
ATCGGTGCCC TGGCCGGGGC AATTCTGACC GCAGCCTATT CCCGTGTCCC CATCCTTTTA 
GATGGGGTCA TCTCCACTGC CGCTGCTCTC ATCGCTGTCC GCATCTGCCC TACGGCCCGC 
TTCTTCCTGA TTCCCTCCCA TTCTTCTGCG GAGATCGGCC ATCGAGCCGC CCTGGAACAA 
CTGGAGCTAA AACCCATCAT GCATCTGGAT TTCCGCTTGG GAGAGGGAAC CGGAGCCGCT 
ATCGCTTTCC ATCTTCTGGA TGCCTCCATC CGCATTCTCA ACGAGATGGC TACTTTTGAA 
TCCGCAGGAG TCAGCGGTAA AAACTAA
 
Protein sequence
MDDFLRQENL SDASLEECET ALDHLIQGIH GLDEQVMAAV QTRLDSLTKP QGSLGVLEAL 
AKQLGGIQGQ PWPEVQKKAI LVMAGDHGVV AEGVSAFPQE VTPQMFYNFL GGGAGINVLA 
RHAGAEVICT DVGMAFPLDP PELMAHRIMN GTHNMAQGPA MSRKEALLSL LTGAKIARQA 
IDSGVNVLAT GEVGIGNTTP STAIISLLTG LPPQEVTGRG TGLDDEGLIR KQNVIARSIA 
INQPDPKDGV DILSKIGGLE IGALAGAILT AAYSRVPILL DGVISTAAAL IAVRICPTAR 
FFLIPSHSSA EIGHRAALEQ LELKPIMHLD FRLGEGTGAA IAFHLLDASI RILNEMATFE 
SAGVSGKN