Gene Dhaf_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3173 
Symbol 
ID7260190 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3399438 
End bp3400609 
Gene Length1172 bp 
Protein Length390 aa 
Translation table11 
GC content44% 
IMG OID643563099 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_002459632 
Protein GI219669197 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAAAAA ACGGGAAACG GTATAATCAA GAATTCAAAC ATGACATTAT ACGCTTAATC 
ACTGAAGAAA ACCGTTCAGT TTCAAGTGTG GTTCAAGATT TTGGGGTCAA TGAGCAAACT
GTGCGCAACT GGCTTAAGCA AACCAAAGAG AGGCAAGATC CTATCAAGAC CAAGATAGCC
GAGCTTGAAG CTGAGCTTAA AGCAAGGGAT AAAAAGATTG CCGATCAGGA GTTAACGATA
GATATCTTAA AAAAGGCTAC CGCCATCTTC GCCCAAAGCA ACCGGAAATA ATCTATCAGA
TGATTAAAAA AGCCAGCAGC TCCAGCTGCC CGGTTGAGAA GATGTGCGAA ACCTTAGAGG
TATCTCGGAG CGGTTATTAT GATTGGGATA GGCGTGAACC CAGCAAGCGT CAAAAAGAGA
ACGAAACGAT TCTTAAGGTG ATGAAGGAAA GCCATACCAA GGCTCAGGCA ATGATTGGTC
TGGATAAACT TTGGAGCGAT GTCAAAGAGG CAGGGTTTCA ATGCGGTAGA AACCGGGTTT
ACCGATTACA AAAGCAACAT GGACTATACA GTGTTCGAAA GAAGCCCTAT CGCGTCTGTC
TCACCGACTC GAATCATGAT TTGCCCAAAG CCCCGAATCT CTTAAACCAA AAATTTAAGG
TTGAGCACCC GAATAAAGTC TGGGTCACGG ATATCACAGA ATTTAAAACA GCTAAAGGAA
GCAAGCTGTA TCTGGCTGCC ATCAAGGACT TATTTCATAA AGAAATTGTG GGTTGGGCTT
TGGCTGAACA CATGAGGACT GAGCTCTGTT TGGAAGCCTT AAGGAACGCT GTCAAGCGTC
ATAGACCGCT CAAAGGGTTG ATTCATCATT CGGATCAAGG GCGGCAATAC TGCAGCACCG
TCTATGTCGA AGAATTAAAG CACTGGGGAA TGATACGAAG TATGAGCAGA AAGGGCAACC
CCTTTGATAA TGCCTGCGCA GAGTCTTTTT TCAGCACCAT TAAATCAGAA AGGCTCCATC
ACAAAACATA CAAAGACATC GAGGAAGCAA GGCGGGATAT CTTTTGGTAC ATCGAATGTT
TTTATAATCG ACAACGGAGG CATCAAGCGT TAGGGAATCT GACACCGGCA GCTTTTTTAA
AGAAGCACTG TGAGACCCAA AAGGCTGCTT AG
 
Protein sequence
MSKNGKRYNQ EFKHDIIRLI TEENRSVSSV VQDFGVNEQT VRNWLKQTKE RQDPIKTKIA 
ELEAELKARD KKIADQELTI DILKKGYRHL RPKQPEIIYQ MIKKASSSSC PVEKMCETLE
VSRSGYYDWD RREPSKRQKE NETILKVMKE SHTKAQAMIG LDKLWSDVKE AGFQCGRNRV
YRLQKQHGLY SVRKKPYRVC LTDSNHDLPK APNLLNQKFK VEHPNKVWVT DITEFKTAKG
SKLYLAAIKD LFHKEIVGWA LAEHMRTELC LEALRNAVKR HRPLKGLIHH SDQGRQYCST
VYVEELKHWG MIRSMSRKGN PFDNACAESF FSTIKSERLH HKTYKDIEEA RRDIFWYIEC
FYNRQRRHQA LGNLTPAAFL KKHCETQKAA