| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3167 |
|---|
| Symbol | trmB |
|---|
| ID | 7260184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3391764 |
|---|
| End bp | 3392405 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643563093 |
|---|
| Product | tRNA (guanine-N(7)-)-methyltransferase |
|---|
| Protein accession | YP_002459626 |
|---|
| Protein GI | 219669191 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
|---|
| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000000221792 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTTA GACGAAAAGC CTGGGCAAGA CCTGAGCTGG AGAGTGATCC TAAGGTTATC
TATAATCCTA TGCAGTATAA GGAAAATTGG CAGGAGGCCT TTGGCAATAA TCACCCTATT
CATCTTGAAC TGGGATGCGG ACGGGGGCAG TTTATCAATC AATGTGCAGA GCTGAACCCT
CATATCAATT ATATAGCTAT CGATCTTTAT GATGAGGTGC TGGTCAAAGC TCTGCGAAAA
ATTAATGAGA AGGCTCTCCA TAATGTAAGA GTTATTCCTA TGAATATTGC CAAGCTGGAG
AGTATCTTCA AGCATGACCA GATAGAAAAG ATCTATATTA ATTTTTGCAA TCCATGGCCC
AGCCGAAGGC ATCATCACAA AAGACTAACA CATCCTCAAT TTCTGTCGGT CTATAAAAAG
CTTATGAAAG ACCATTCAGA AATATGGTTT AAAACAGATG ATGATGAATT GTTTAAAGAT
AGCTTAAGGT ACTTTGCCGA GGAAGGCTTT ATTGAAAAGT ACAGAACCTT TGATTTGCAT
CAAAGTGAAT TCACCGAAAA TATTAAGACT GAATATGAAG AAAAGTTCAG CAACCAGGGA
GTTAAGATTA AATTTGGGAT ATTTGAGGTC AATAAGGGTT AG
|
|---|
| Protein sequence | MRLRRKAWAR PELESDPKVI YNPMQYKENW QEAFGNNHPI HLELGCGRGQ FINQCAELNP
HINYIAIDLY DEVLVKALRK INEKALHNVR VIPMNIAKLE SIFKHDQIEK IYINFCNPWP
SRRHHHKRLT HPQFLSVYKK LMKDHSEIWF KTDDDELFKD SLRYFAEEGF IEKYRTFDLH
QSEFTENIKT EYEEKFSNQG VKIKFGIFEV NKG
|
|---|
| |