Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3164 |
Symbol | |
ID | 7260175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3382597 |
End bp | 3383103 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643563084 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002459623 |
Protein GI | 219669188 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02950] RNA polymerase sigma factor, SigM family |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATATGG AGCTTAGTGC GCCGATCTTC AGCTATCTCT TGCGTCTTTC CGGTGATTAT GATCTGGCAG AGGAGTTAAC TCAAGAAACC TTCTTGCGTG CGTTACAGGC ACTGCCGAAA TTTCGCGAAG AAGCTTCAGT AAAAACATGG TTGTATGCTA TTGCACGTAA TACCTACCTT AGCAAGATTA ATAAAAGTCA TCCTAAGGGC ATCGTCTTTA CTTCCTTCGA TGAGGAATTT TTGGATGGAG GAGAGAGGTC TGCTGATCCA GCGGAGCAGC TTCTGCAAAA AGAGCAAAGC CAGACTATGC AAAGAGCCAT CTACTGCTTG CCGGAAACCT ATCGGACAGT GATCATTCTC AGAGAGTTTG AAGAATTGAG CTATGGTGAG ATCGCAAAGA TATTGGGGAA GACGGAAAAC TGGGTTCGGG TAACCTTCTT TAGAGCGAAA CAGAAGCTCA AAGAGACAAT ACTGGCGTTG GAAAGGGGGA AGGAAAGTGA AGATTGA
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Protein sequence | MYMELSAPIF SYLLRLSGDY DLAEELTQET FLRALQALPK FREEASVKTW LYAIARNTYL SKINKSHPKG IVFTSFDEEF LDGGERSADP AEQLLQKEQS QTMQRAIYCL PETYRTVIIL REFEELSYGE IAKILGKTEN WVRVTFFRAK QKLKETILAL ERGKESED
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