Gene Dhaf_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3164 
Symbol 
ID7260175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3382597 
End bp3383103 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content45% 
IMG OID643563084 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002459623 
Protein GI219669188 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02950] RNA polymerase sigma factor, SigM family 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATATGG AGCTTAGTGC GCCGATCTTC AGCTATCTCT TGCGTCTTTC CGGTGATTAT 
GATCTGGCAG AGGAGTTAAC TCAAGAAACC TTCTTGCGTG CGTTACAGGC ACTGCCGAAA
TTTCGCGAAG AAGCTTCAGT AAAAACATGG TTGTATGCTA TTGCACGTAA TACCTACCTT
AGCAAGATTA ATAAAAGTCA TCCTAAGGGC ATCGTCTTTA CTTCCTTCGA TGAGGAATTT
TTGGATGGAG GAGAGAGGTC TGCTGATCCA GCGGAGCAGC TTCTGCAAAA AGAGCAAAGC
CAGACTATGC AAAGAGCCAT CTACTGCTTG CCGGAAACCT ATCGGACAGT GATCATTCTC
AGAGAGTTTG AAGAATTGAG CTATGGTGAG ATCGCAAAGA TATTGGGGAA GACGGAAAAC
TGGGTTCGGG TAACCTTCTT TAGAGCGAAA CAGAAGCTCA AAGAGACAAT ACTGGCGTTG
GAAAGGGGGA AGGAAAGTGA AGATTGA
 
Protein sequence
MYMELSAPIF SYLLRLSGDY DLAEELTQET FLRALQALPK FREEASVKTW LYAIARNTYL 
SKINKSHPKG IVFTSFDEEF LDGGERSADP AEQLLQKEQS QTMQRAIYCL PETYRTVIIL
REFEELSYGE IAKILGKTEN WVRVTFFRAK QKLKETILAL ERGKESED