Gene Dhaf_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3053 
Symbol 
ID7260064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3272724 
End bp3274208 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content47% 
IMG OID643562973 
Productthreonine synthase 
Protein accessionYP_002459512 
Protein GI219669077 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTACG AAAGCACGAG AGGGAATTTC CCTGATCAAA CTGGAAAAGA AGCGATTGCC 
TTGGGCATGG TTCCGGTAGG GGGGTTATTT GTTCCGAAAG AACTTCCGCA AATTCACTGG
GAGGAAGTTC GCGGCATTTC CTATCCAGAA CTGGCCCAAT TGATTTTTAA ACGCTATCTA
CCCGATTTTC CGGAGGAGAA ATGTGTTGAG ACTTCAAAAA TATACACGGA TGGAGTTTTC
GATTCGGATA ATCCGGCTCC CCTGGTGAAT GTGGGAGATA TGGGAATACT GGAGCTATGG
CATGGTCCTA CTGCCGCCTT CAAAGATATG GCCTTGCAGG CTTTGCCCCA TCTTTTGGGA
GAAAGCATGC AGGTTCTCAC TCACACCGAC AAGGTGCTGA TTTTGGTCGC TACGTCAGGA
GATACGGGAA AGGCCGCCCT GGAGGGATTT AAAAATGTTG AGGGTACAGA GATCATGGTC
TTTTATCCTG AACATGGAGT GAGCACTGTT CAGGAGCAGC AAATGACCAC AACTGATGGG
GTCAACACTA AAGTAGTTCC CGTCGTCGGT AATTTCGATC AGTGTCAGTC CGCTGTGAAA
GAGATTTTTG GCAATCCTGA CTTAAGAGAA AAATTTAAAG AACAGGGCAT TGCCTTTTCT
TCGGCAAACT CTATTAACTG GGGAAGGCTT TTGCCGCAAA TCATCTATTA CTATTGGGCT
TATTTACAAG GGGTGGAATC GCAACGAATT CGTCCCGGAG AAAAAATGAA TGTGGTGGTA
CCCACAGGGA ACTTCGGCAA CATTCTTGCC GCTTATTATG CCAAGGAAAT GGGATTGCCT
ATTCATCAAC TCATTTGTGC CTCCAATGAG AATAATGTGC TGACAGATTT CTTCAGCCAA
GGAGTGTATA ACCGCAAGCG TCCTTTTTTC GTGACCTCTT CTCCTTCGAT GGATATTTTA
ATATCCAGTA ATTTTGAGCG CTTCCTTTAC GAAGTTTCCG GGAGGGATGG GTCAAAGGTA
GGAAAGTGGT ATGACGACCT GCAGGCCCTT GGCGAATTTA CTGTGGATTC GGATACTTTA
GCCAAGGCCA GGAAAGCAGT CATTGCCGGA TGGGCCGGTG AGGCGGATGT GCTGGCGGTC
ATACAATCCG TATATAAAGA GCATGCCTAT GTTCTGGATC CCCATACAGC CGTAGCGGTG
AAAGTATATC AAGATTATCT TCGGGAATCA GGAGACAACA CCTTTACCAT GATCGCCTCA
ACAGCCAGTC CCTTTAAATT TGCCAAAACC GTCTTAGAGG GCATTGATGC AGATGCCTTA
GAAGATGATG AATGGGCGAA TTTGCGGAAG CTGAGGGAGA TTACCGGCTG GAGCATACCC
AAAGGTCTCC AGGGGTTAGA GGATAAAGAG ACTTTCGGTT TGGAGCCGGT ACAACCTGAG
GAGATTCCGG AACTCATCCA GAAGGTTTAT ATACCCAATA GATAG
 
Protein sequence
MLYESTRGNF PDQTGKEAIA LGMVPVGGLF VPKELPQIHW EEVRGISYPE LAQLIFKRYL 
PDFPEEKCVE TSKIYTDGVF DSDNPAPLVN VGDMGILELW HGPTAAFKDM ALQALPHLLG
ESMQVLTHTD KVLILVATSG DTGKAALEGF KNVEGTEIMV FYPEHGVSTV QEQQMTTTDG
VNTKVVPVVG NFDQCQSAVK EIFGNPDLRE KFKEQGIAFS SANSINWGRL LPQIIYYYWA
YLQGVESQRI RPGEKMNVVV PTGNFGNILA AYYAKEMGLP IHQLICASNE NNVLTDFFSQ
GVYNRKRPFF VTSSPSMDIL ISSNFERFLY EVSGRDGSKV GKWYDDLQAL GEFTVDSDTL
AKARKAVIAG WAGEADVLAV IQSVYKEHAY VLDPHTAVAV KVYQDYLRES GDNTFTMIAS
TASPFKFAKT VLEGIDADAL EDDEWANLRK LREITGWSIP KGLQGLEDKE TFGLEPVQPE
EIPELIQKVY IPNR