Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3000 |
Symbol | |
ID | 7260010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 3221947 |
End bp | 3222804 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643562919 |
Product | ABC-3 protein |
Protein accession | YP_002459459 |
Protein GI | 219669024 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0223089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTAC TTATTGAGCC TTTGCAATAT GCTTTTATGC AGCGGGCCCT CATCGGCACC ATTGCTGTGG CAGTGCTTAC GGCAGTCGTA GGAACCTTTG TGATCTTAAG ACGTCTGGCC TTTATCGGCG AAGGTTTAGC ACATGGTTCT TTAGCGGGGT TAGCTATCGG CTATCTCCTG GGCTGGAATT TATACATCGC CGGCAATATC TATACCATAG GTCTTGCCTT ATTTATTGGT GCGCTTCATG AGAAAGCCAA AGTCAGCCTG GACACAGCCA TTGGCATTCT CTTTTCCACT TCCATGGCTT TAGGGGTAGC ATTAATCAGC TCCTTAAAAT TCTATTCAAG CAATTTGACC GGCTATCTTT TCGGTTCGGT ATTATCCATC GGTTCTTTTG ACTTGATGAT CATTGTTGGT TCAACATGTG TGATTCTTGC CATTCTTGCG GTATTCTACA AAGAATTCGT TTATTATGCC TTTGATCCGG AAATGGCCGA AGTGACAGGG TTGCCCCGTG CACGCCTGCA TTATGCCATG CTGGCCATGA TCGCTGTGAC CGTAGTGGTG GCCTCTCAAA CCGTTGGCAT TATTCTTGTC ACCGCACTGC TGACTATACC TGCCGCGTCG GCTTTTCAGT GGACTCATTC CCTGAAGAAA TTAGTGCTGC TCTCTGTATT TTTTGGATTA ATCAGCGCCA TCCTCGGCCT TTATCTCTCT TATTATTTAA ATGTGGCTTC CGGAGCCAGT ATCGCTCTGA CAGCAGCCGT AATCTTTTTA CTGAGCTTTC TCTGTTCGCC CAAACGAGTC AGCCTGGGCC GCAGTTTTGG CCGTGTAAAG ACCTCAGAGA AAGGGTGA
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Protein sequence | MHLLIEPLQY AFMQRALIGT IAVAVLTAVV GTFVILRRLA FIGEGLAHGS LAGLAIGYLL GWNLYIAGNI YTIGLALFIG ALHEKAKVSL DTAIGILFST SMALGVALIS SLKFYSSNLT GYLFGSVLSI GSFDLMIIVG STCVILAILA VFYKEFVYYA FDPEMAEVTG LPRARLHYAM LAMIAVTVVV ASQTVGIILV TALLTIPAAS AFQWTHSLKK LVLLSVFFGL ISAILGLYLS YYLNVASGAS IALTAAVIFL LSFLCSPKRV SLGRSFGRVK TSEKG
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