Gene Dhaf_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3000 
Symbol 
ID7260010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3221947 
End bp3222804 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content47% 
IMG OID643562919 
ProductABC-3 protein 
Protein accessionYP_002459459 
Protein GI219669024 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0223089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTAC TTATTGAGCC TTTGCAATAT GCTTTTATGC AGCGGGCCCT CATCGGCACC 
ATTGCTGTGG CAGTGCTTAC GGCAGTCGTA GGAACCTTTG TGATCTTAAG ACGTCTGGCC
TTTATCGGCG AAGGTTTAGC ACATGGTTCT TTAGCGGGGT TAGCTATCGG CTATCTCCTG
GGCTGGAATT TATACATCGC CGGCAATATC TATACCATAG GTCTTGCCTT ATTTATTGGT
GCGCTTCATG AGAAAGCCAA AGTCAGCCTG GACACAGCCA TTGGCATTCT CTTTTCCACT
TCCATGGCTT TAGGGGTAGC ATTAATCAGC TCCTTAAAAT TCTATTCAAG CAATTTGACC
GGCTATCTTT TCGGTTCGGT ATTATCCATC GGTTCTTTTG ACTTGATGAT CATTGTTGGT
TCAACATGTG TGATTCTTGC CATTCTTGCG GTATTCTACA AAGAATTCGT TTATTATGCC
TTTGATCCGG AAATGGCCGA AGTGACAGGG TTGCCCCGTG CACGCCTGCA TTATGCCATG
CTGGCCATGA TCGCTGTGAC CGTAGTGGTG GCCTCTCAAA CCGTTGGCAT TATTCTTGTC
ACCGCACTGC TGACTATACC TGCCGCGTCG GCTTTTCAGT GGACTCATTC CCTGAAGAAA
TTAGTGCTGC TCTCTGTATT TTTTGGATTA ATCAGCGCCA TCCTCGGCCT TTATCTCTCT
TATTATTTAA ATGTGGCTTC CGGAGCCAGT ATCGCTCTGA CAGCAGCCGT AATCTTTTTA
CTGAGCTTTC TCTGTTCGCC CAAACGAGTC AGCCTGGGCC GCAGTTTTGG CCGTGTAAAG
ACCTCAGAGA AAGGGTGA
 
Protein sequence
MHLLIEPLQY AFMQRALIGT IAVAVLTAVV GTFVILRRLA FIGEGLAHGS LAGLAIGYLL 
GWNLYIAGNI YTIGLALFIG ALHEKAKVSL DTAIGILFST SMALGVALIS SLKFYSSNLT
GYLFGSVLSI GSFDLMIIVG STCVILAILA VFYKEFVYYA FDPEMAEVTG LPRARLHYAM
LAMIAVTVVV ASQTVGIILV TALLTIPAAS AFQWTHSLKK LVLLSVFFGL ISAILGLYLS
YYLNVASGAS IALTAAVIFL LSFLCSPKRV SLGRSFGRVK TSEKG