| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2964 |
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| Symbol | |
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| ID | 7259972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3184636 |
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| End bp | 3186408 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643562882 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002459423 |
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| Protein GI | 219668988 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000892487 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGTG TTTTACTCGA AATCCAAGAG ACAGTCAAAA AATATACAGA GATTATGGCA
AAGATATCAA GAGTGGACGT AGAGGTTGTG GATACGGAAT TATTTCGGGT AGCCGGTACC
GGTATGTTTG CTGATCATGT AAACGAGGAT ATGTCCGCAG AGGGATATGC CTATAGTCAT
GTTATAAAAG AAGGCCGGCT TCAGGTTATT TACTCTCCAG GTCATGAATT GATCTGTAAC
AATTGTCCCA AGCGGGACAG CTGTGCTGAA GAAATAGAGA TTGCTATGCC GATCTGGGCC
AGTGATCAAA TTATAGGTGT GATCGGATTG GTGGGTTCCA ATGCCCAGCA ACGCAATGCG
ATCCTGGCGG ATGAAGAGAC ATATCTTGGG TTGATTGAGC AGATCGCTAA TTTTATTGCG
GCTAAAGCGA TCGAACAGAT CGATCGCAAG GAAAAGGAGT CAATGCTGTC AACGCTTGCT
TTTGCTATTA ATAATATGGA AGAAGGGGTT CTCATTGTCA GCCGCAAGCA TACCATCACC
ATGGCCAATC GGGCCGCCAA GCAGCAGCTG ATGTTGAACA CTCTCGAAGG TATGCGGATT
ATGTTGTCTC CAACCGGGGA TAAGCTTAAC GGGAAGACAG AATATATGTT GAATGTCGGA
GCAAAGACAT TTCGTATTCT TGGCCAAATT AATTCTTTGC TCAAAGCGGA TGACTCTTAT
GCCGAGCTTC TATCGTTTAC CCCAACCCGT GATCTGAATA AAAAATTGTA CGCCATGACT
GCTGCGGTGA GTGAAGGTAT AGTTGTAGGC AATAGTCAAG AGACGATAGC CCTTCGTACC
CAAATTGGAA AAATAGCGAA CAGCACTTCA ACAGTGCTTA TCACTGGAGA AAGCGGTACC
GGCAAGGAGG TTGTGGCTAC CGCTATTTGG CGTGCCGGTG ATCGTAAAGA ACAGCAATTT
GTAGCGGTGA ATTGTGCGGC TATTCCTGAG AGTCTGCTGG AAGCTGAATT ATTCGGTTAT
GTAAAAGGGG CTTTTACAGG AGCCGATCCT AACGGCCGGG TAGGAAAATT TGAACTGGCT
AATCAGGGGA TCATCTTTCT GGATGAGATC GGCGATATGC CCCTGTATTT GCAGGCCAAG
CTTCTACGTG TTCTTCAGGA ACGTAAAATC ACCCGTATCG GTTCCAATCA CTTGATTTCC
ATCGATGTGC GTGTCATTGC CGCTACAAAT AAAGATATCC GAACCATGAT TGCCAATGGC
AAATTCCGCG AAGATCTGTA TTATAGACTG AACGTGATTC CTGTGAAGAT TCTGCCCCTT
CGCCACCGTC TTGAGGATAT TCCCGTTCTT GCCAACTTAT TTGCCCAACG GTATGCGGTA
AGGCTTGGCA AGCCGGAGCG TGAAATTTCA CCGGCAGCGA TGCGCGCCTT GCTGGAGTAT
CCATGGTACG GCAATGTTCG GGAATTGGAA AACACAGTGG AATATATGGT GAATATGTGC
AATGATCAGG ATGTTCTGGG GTTAGAAACA TTACCCAAGG ATTTTTTGGT TAATGAACAT
ACTGTCATAA TTCAGGCGGA TAGCTCTTAT GAAAAAGAAA AAAAGCACGG TTCTGAGGAA
AAGGTAATAC CCCTGCAGGA GGTTGAACAA CGAGAAATAG CAAAAGCTCT GCGTCTTCAC
GGTATGAATA CTCAAGGGAA AAAAGAGGCG GCGAAAAGTC TCGGTATTAG TCTTGCAACT
TTATATCGTA AACTAGAACA ATTCTCAAAT TGA
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| Protein sequence | MASVLLEIQE TVKKYTEIMA KISRVDVEVV DTELFRVAGT GMFADHVNED MSAEGYAYSH
VIKEGRLQVI YSPGHELICN NCPKRDSCAE EIEIAMPIWA SDQIIGVIGL VGSNAQQRNA
ILADEETYLG LIEQIANFIA AKAIEQIDRK EKESMLSTLA FAINNMEEGV LIVSRKHTIT
MANRAAKQQL MLNTLEGMRI MLSPTGDKLN GKTEYMLNVG AKTFRILGQI NSLLKADDSY
AELLSFTPTR DLNKKLYAMT AAVSEGIVVG NSQETIALRT QIGKIANSTS TVLITGESGT
GKEVVATAIW RAGDRKEQQF VAVNCAAIPE SLLEAELFGY VKGAFTGADP NGRVGKFELA
NQGIIFLDEI GDMPLYLQAK LLRVLQERKI TRIGSNHLIS IDVRVIAATN KDIRTMIANG
KFREDLYYRL NVIPVKILPL RHRLEDIPVL ANLFAQRYAV RLGKPEREIS PAAMRALLEY
PWYGNVRELE NTVEYMVNMC NDQDVLGLET LPKDFLVNEH TVIIQADSSY EKEKKHGSEE
KVIPLQEVEQ REIAKALRLH GMNTQGKKEA AKSLGISLAT LYRKLEQFSN
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