Gene Dhaf_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2905 
Symbol 
ID7259913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3113885 
End bp3115342 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content48% 
IMG OID643562823 
Productcation transporter 
Protein accessionYP_002459364 
Protein GI219668929 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.313942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATT CGCTTGTGCA AGGGATCGTT GGCAGGCTTC TCATGGGATA TGCCTTGACT 
ATGTTCGTTC CTTTGGTCCT GGCGGCATTT AAGAATGAAG ACAGCACGTG GGCTTTTTTA
CTGACCCTCT TGATTACTGC TTGTCTGGGC GCTGCCATGG TTTATTTTCG GAAACCTACC
CAAGAAAAAA TGAGTATTAG AGAAAGCTTT GTCATTGTCG GCGGGGCCTG GCTTCTGACC
TCTTTGCTCG GGGCTTTGCC CTTTTGGATC TCGGATAGTG TGCCCACTTA TATCGATGCT
CTGTTTGAAT CCGTCTCCGG GTTGACAACC ACGGGTTCCA GTGTGATTGA TGATGTTGAG
GCATTGCCCT TATCCATCCT GCTTTGGCGA AGTATCACCC ATTGGCTGGG CGGAATAGGG
ATTATTGTCC TCTTCATCAT TTTGCTGCCC AGTACGGGTT TTGGTGCAGT GCATTTATTC
AATGCGGAAG TGCCGGGTCC GTTGGGCAAG CGTACGATGC CCCGGATTCG CGACACAGCA
ATTACCATTT GGAAAATCTA TGCCTTTTTT ACCGTCATCC TTGTTGCTCT GCTTATGTTG
GCGGGCATGA GTCTGTTTGA TGCCATAAAC CATGGTTTCT CCACTATTTC TGCCGGGGGA
TTTTCCACCA AAAATACAAG TATGATGTAC TATAATAGCC TGGGGATTGA ACTTGTGGTG
ATCCTGTTTA TTATCATTGC CGGGGGGAAT TTCCGTATTT ATTTGGAGGC TTGGACGAAG
AAGAGCTTTA AGCCGTTTAA GAATACGGAG TTTATTACTT ATCTTTCGAT TATCATGTTC
AGCACCTTGC TGATTGTGGG AGGATTATGG CTGACTCACG ATAAACCGCC TGATTATGCC
GTGCGGCATG CCTTGTTTCA AGTGGTCTCG CTGGTTACGG GGACGGGCTT CGCCTCTACG
GATTATAATC AGTGGCCTGC CATTACCAAG TTAACTCTCC TGGCGCTGAT GTTTGTCGGC
GGGTGCGCCG GTTCCACTAC AGGAGGGATG AAAGTATCCC GAATTATGTT GCTTTCGAAG
CATGTTTGGG CCGTATTAAC CCGCGGATTG CATCCCCGTG CAGTATCCAG CATCAAACTG
GATGGGAGAG CTGTGGATGC TGTCGCTGTT AATATGGTCA GTGTGTTTTT CTTCCTTTAT
GTAGGGATTT TTGCCTTAGC CACTATTGTT ATGGCAGGAA CAGGACTTGA GCCTTTTGAC
GCCATGAGTG CGGTAGCTGC TTCATTGGGC AATGTGGGGC CCGGTTTTGG CTTAGTAGGT
CCGACCACAA CGTATTCGGG TATCACACTC TTCGGTAAAT TTATATTGTC ACTTTGTATG
CTGCTCGGCC GTTTGGAGTT ATTTACTTTG CTCATTTTAT TGCGTCCCGA GTTTTGGAGA
ACAAAAGGCG GCTGGTAA
 
Protein sequence
MNYSLVQGIV GRLLMGYALT MFVPLVLAAF KNEDSTWAFL LTLLITACLG AAMVYFRKPT 
QEKMSIRESF VIVGGAWLLT SLLGALPFWI SDSVPTYIDA LFESVSGLTT TGSSVIDDVE
ALPLSILLWR SITHWLGGIG IIVLFIILLP STGFGAVHLF NAEVPGPLGK RTMPRIRDTA
ITIWKIYAFF TVILVALLML AGMSLFDAIN HGFSTISAGG FSTKNTSMMY YNSLGIELVV
ILFIIIAGGN FRIYLEAWTK KSFKPFKNTE FITYLSIIMF STLLIVGGLW LTHDKPPDYA
VRHALFQVVS LVTGTGFAST DYNQWPAITK LTLLALMFVG GCAGSTTGGM KVSRIMLLSK
HVWAVLTRGL HPRAVSSIKL DGRAVDAVAV NMVSVFFFLY VGIFALATIV MAGTGLEPFD
AMSAVAASLG NVGPGFGLVG PTTTYSGITL FGKFILSLCM LLGRLELFTL LILLRPEFWR
TKGGW