| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2832 |
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| Symbol | |
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| ID | 7259840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3043677 |
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| End bp | 3047855 |
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| Gene Length | 4179 bp |
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| Protein Length | 1392 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643562751 |
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| Product | recombination helicase AddA |
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| Protein accession | YP_002459292 |
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| Protein GI | 219668857 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATC CCAAATGGAC CCCGGCCCAG CAGGCGGCCA TTGACTTGAA GGGGCAGCTT
CTCGTAGCGG CGGCTGCCGG TTCGGGTAAG ACCGCAGTTC TTGTCCAAAG GCTCTTCAAG
CAGATTACGG ATGTGGATGA GCAAGTGGAT GTGGATCGGT TTCTGGTGGT GACCTTTACG
AAAGCGGCCG CCGCAGAAAT GCGGGAACGC ATCGGGAAAG CTCTGGATGA AGCGCTCTTT
GGGGCGGCGG AGCCTGCTCA GGTGGAACAC CTCCTGCAAC AGAGGGCCTT GCTTTATCGG
GCCAGTATCA CCACCCTGCA CTCATTTTGT ATGGAACTGA TTCGTCAGTA TTTTTACCTT
ATTGAGCTGG ACCCGGCTTT TCGCGTAGCC GATGAAGCGG AAGCGGACCT GCTTCGCCAG
GATACTCTTG AAGATTTGTT TGAAGCGTAT TACGGGGAGG AGACACCGGC CTTTCAAAGC
CTGGTCGATG CCTTCGGCAC CGATCGTGAT GATCAGCCTT TGATGGCCTC CATTCTTAGG
CTTCACGAAT TTGCCATGAG CCAGGTCCAT CCTGGGGAGT GGCTGGAACA CCTGCCGGCA
GCGTATGATT GGCACAGCCT TGATGACCTG ATGGAAAGCC CCTGGGGGCA GGTGGTCCGG
CAGGGGGTTC GGGATAAAGT GGAGGAAGGT CTTATCCTCC TGGAGCGGGC CTATCGGCTG
GCCGAGTTGC CGGGAGGTCC TGTTCATTAT CTGCCTGTTC TGGAAGACGA TCAATCCAGG
TTGGGTTTTC TGCGGGAAAT GGCGGAGAAG GGGACTTGGA GTGACATCGA GACGGCCTTT
AAGTCAGCGG CAGCCTTTCC CGGCCTCCCC CGGGGAAGCA AAAAAAATCT GCCGGACTCC
TTGATTGATG AGGAAAACAG CAAGCGCTTG CGGGAAGAAA GTAAAAAAGC CCGTGATGAG
GCCAAAAAGA AGCTGGAAGA AATCAAGAAT ACGGTGTTTT CAGTACCCCT GACCGATCAG
CTCCCGTTCC TGAACAAGAT GGGGGAATTG GTCGGCACTC TGGCTCAGGT CACCCAACAC
TTTGCCCGGG AGTATCAAAA AGCCAAGCGG CAAAGGAATT GCGTGGATTT TTCCGATCTG
GAACACTATG CCTTACAGCT CCTGGCCAAG GATAAACAGC CTACGGAAAT TGCCTTAAAA
CTCCAGGCCT ACTATGCGGA AGTTCTGGTG GATGAATATC AGGACATCAA TCCCGTTCAG
GAGCGTATTT TGCAGCTGGT TTCCCGTCAA GAGGAGGGGA AGGCCAATCT GTTCATGGTA
GGGGATGTCA AGCAGAGCAT TTATCGTTTC CGGATGGCCG ATCCCGGACT TTTTCTGCGC
AAGTATGGGG AGTTTCCTCA TTATCAGGAA GGGGGGGGAG CTGCCCCTAA TTTGGTCATT
GACCTCAACC AAAATTTCCG CAGCCGCCCT GAAGTGATCC AAGGGATCAA TTATCTTTTC
TATCAGATCA TGACGGAGGG AGCAGGGGAG ATCGTCTATG ATGAGCAGGC TGCCCTGAGA
CCGGGAGCTA AATTTGTCTC CGATGGGGAG CTTAGAACCG CTGAAGGCCC CATTGAAGTT
CATTTATTTG ATCCTAAGGC CATCGATCTT TCCCTGGGTC AGAAAAGAGG AGCTGAAGAT
GCAGCCACGG AAGTGGATTC ACCGGCTAAG GGTGAGGGTG AGGAATTTGA GCAGAATCGG
GAGCCGGAAT CAGGCGATGA TGAATCATCA CTGGAAGAGG CGGAAACAGC CCGTATTGAA
GCCCGTTTAG TGGCAGCCCG CATTCAAAAA ATGGTTCTGG AGAGGGAATT TCAGATTCAT
GATAAGGAAC TGGGCGATTA TCGGCCGGTA CAGTATGCGG ATATCGTGAT TCTTATGCGC
TCCCTGGCCT CGGTAGCCTC TGTGTATGCC GAAGAGTTCC AGAAGGCGGG AATCCCTGTC
TATGCAGAAA CCAACAGCGG TTACTTTGGA ACCAATGAGG TGGACACAGT CTTATCCTTG
CTCAAAATCA TCGATAACCC ACGTCTGGAT ATTCCCTTTG CGGCAGTGCT CCGTTCTCCT
CTGGTAGGGA TGAATGGAAC GGAGTTAGGG AAATTGCGCT CGCTGCTTCC CCAAGGAGAT
TTTTACGAAA CCCTGGTCCT GACCTTTTGG GCAGGTGATG CTCACCGACA AGAAGAGGGG
CATGAATTTT ACTCAGAAAT CAGGGAGATT TTAGGCAAGC ACTGGGAGAG CTTACCGCAA
CTGGAGGTTA AAGTCAGGCA TATCCTGGAG ACATCACCCG AGATCAAAGA GAAGGTGGAT
GCCTTTTTCC CCAAGCTGCA GGAGTGGCGG CACCGTTCCC GGCGGACCTC TCTGGCCGAT
TTGCTGTGGC ATCTCTACGA AGATACCGGA TATCTGGCTT ATGTAGGAAC CTTGCCTGCC
GGTGCACAAC GTCAAGCGAA TTTACGAGTT CTCTATGATC GGGCCTGCCG TTACGAAGCG
ACAAATTATC GGGGCTTATT CCGTTTCCTG CGTTTCCTGG AGAAATTTCA AAGCCAGGGC
AAGGATCTGG GCAATGCCAG CATAGTGGGG GAAAAAGAGA ACGTGGTCCG CTTCATAACC
GTGCATTCCA GTAAAGGGCT GGAATTCCCG GTCGTCTTCA TAGCCGGGTT AGGGAAGAAA
TTTAATACCC GCAGCCTCAG CAGTCAGCTC TTGCTTCACT CACACTTAGG GGTGGGCATT
CCTTTAATAG ATATAGAGAA TCAGGTTCGT TACCCATCTG TTATTCAATA TGCCGTGAAA
GAGCGTCTAT GGCAGGAAGC CCTTGCCGAA GAGCTGCGGA TCCTTTATGT AGCCCTTACC
CGGGGCAAGG AGCGTCTCTT CCTCTTTGGG CATCAGCATA AGCTTGCGGA GGCTATCAAC
AAATGGCGGA GCTTAGCCCT GTCCTGCCCC GACACGGCCT TTCCCGACGG TCAGCTGCGG
GGGGCCAAGA CCTACCTGGA TTGGCTCGGG CCGGCTTTAG TACGTCATCC TGAGGATTTG
TTCAAACTCG GCTCTTTCCC CACAGCCAGT GAACTTCCTG ATAGCTCATC CCAGTGGAAA
GTGATCCTTC ATGATCAGAT CGCCGGCAAG GGACCTGTTC AAGAGGCAAC CAGCTCTCAA
GATGAAATCA TTCTCCCAGA TCAAGAAACC CTTGGAGAAA GAGAAGCTTC TGAGGAAACG
GAAATTCCCG GAGAAACGGA AGCCTCGGGA AAAACGGAAA TCCCTGGAGA AACAAAAAAC
TCTGAAGAAA CGAAAACCTC TGAGGATAAG AAAAACCTTG AAGCCCAAAC GCCTGAAACG
GCGGACTTGG ATACTAAAAA TTTACAGGAG GAAGTTTTCC GGCAGCTTAA CTGGCAGTAT
CCTTACCCTG AAGGGGTCAA TCAATCCGCT AAGACCAGTG TCAGTGAATT GAAACGGCAG
TCATTATGGT ACATGGATAA TGAATACTCG TCTCCATCTT CATCCTCATC TTCATCTCCG
TCCGCCTTGT CCGCGCCCAG TTTTCTGCGC CCTCAATTCA TTGTGTCCCG GAAGGAATTG
ACGCCTGCGG AACGAGGCAC AGCAGTGCAT GCCGCCATTC AGCATTTACC CTTGGCCCTA
TGGCGGGATA CTTGGGAGGA GCTGGCTCAG GAAGTCCGCG AAAGCATGCT TCAAGAGCAT
ATCGACTCCT TGATCCGGCG GGAGATTCTC AGTGCAGAGC AGGGGGGAGC GGTATCCGTT
TCCCAGCTAA AGAATCTGCT GGACTCCACC AGCGGCAAAC GTCTCTGGGA AGCTGAAGAA
GTGCGGAGAG AAGTTCCCTT TACCCTCTCC TTGCGTCTCA GGGCCCAAAA AGAACCGGTG
CTTGTACAGG GCATCATCGA TGCAGTGCTG CTCTCTCATC AGGAGCATGA GGCCCAGGTT
ATGGATTTTA AGACTGATAA TTTAGCAGGG GTGCCCGACC CGGAGCTGGT TTTAACCCAG
CGCTACGGAC TCCAGCTGGG GCTGTATGCC CTGGCGGTGG AAAGGCTGCT CAAGGTCCCT
GTCCGGGAAT GCATCATCTA TGCAACCTCC CTTAATCGTG AGTTTGTTAT GCAGAGAGAG
GCTGTTCAAG CTGCTCTGGA GTCGGTGGTT ATAGTGTAG
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| Protein sequence | MNNPKWTPAQ QAAIDLKGQL LVAAAAGSGK TAVLVQRLFK QITDVDEQVD VDRFLVVTFT
KAAAAEMRER IGKALDEALF GAAEPAQVEH LLQQRALLYR ASITTLHSFC MELIRQYFYL
IELDPAFRVA DEAEADLLRQ DTLEDLFEAY YGEETPAFQS LVDAFGTDRD DQPLMASILR
LHEFAMSQVH PGEWLEHLPA AYDWHSLDDL MESPWGQVVR QGVRDKVEEG LILLERAYRL
AELPGGPVHY LPVLEDDQSR LGFLREMAEK GTWSDIETAF KSAAAFPGLP RGSKKNLPDS
LIDEENSKRL REESKKARDE AKKKLEEIKN TVFSVPLTDQ LPFLNKMGEL VGTLAQVTQH
FAREYQKAKR QRNCVDFSDL EHYALQLLAK DKQPTEIALK LQAYYAEVLV DEYQDINPVQ
ERILQLVSRQ EEGKANLFMV GDVKQSIYRF RMADPGLFLR KYGEFPHYQE GGGAAPNLVI
DLNQNFRSRP EVIQGINYLF YQIMTEGAGE IVYDEQAALR PGAKFVSDGE LRTAEGPIEV
HLFDPKAIDL SLGQKRGAED AATEVDSPAK GEGEEFEQNR EPESGDDESS LEEAETARIE
ARLVAARIQK MVLEREFQIH DKELGDYRPV QYADIVILMR SLASVASVYA EEFQKAGIPV
YAETNSGYFG TNEVDTVLSL LKIIDNPRLD IPFAAVLRSP LVGMNGTELG KLRSLLPQGD
FYETLVLTFW AGDAHRQEEG HEFYSEIREI LGKHWESLPQ LEVKVRHILE TSPEIKEKVD
AFFPKLQEWR HRSRRTSLAD LLWHLYEDTG YLAYVGTLPA GAQRQANLRV LYDRACRYEA
TNYRGLFRFL RFLEKFQSQG KDLGNASIVG EKENVVRFIT VHSSKGLEFP VVFIAGLGKK
FNTRSLSSQL LLHSHLGVGI PLIDIENQVR YPSVIQYAVK ERLWQEALAE ELRILYVALT
RGKERLFLFG HQHKLAEAIN KWRSLALSCP DTAFPDGQLR GAKTYLDWLG PALVRHPEDL
FKLGSFPTAS ELPDSSSQWK VILHDQIAGK GPVQEATSSQ DEIILPDQET LGEREASEET
EIPGETEASG KTEIPGETKN SEETKTSEDK KNLEAQTPET ADLDTKNLQE EVFRQLNWQY
PYPEGVNQSA KTSVSELKRQ SLWYMDNEYS SPSSSSSSSP SALSAPSFLR PQFIVSRKEL
TPAERGTAVH AAIQHLPLAL WRDTWEELAQ EVRESMLQEH IDSLIRREIL SAEQGGAVSV
SQLKNLLDST SGKRLWEAEE VRREVPFTLS LRLRAQKEPV LVQGIIDAVL LSHQEHEAQV
MDFKTDNLAG VPDPELVLTQ RYGLQLGLYA LAVERLLKVP VRECIIYATS LNREFVMQRE
AVQAALESVV IV
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