Gene Dhaf_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2820 
Symbol 
ID7259828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3028339 
End bp3029343 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content50% 
IMG OID643562739 
ProductGlyoxylate reductase 
Protein accessionYP_002459280 
Protein GI219668845 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000566306 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGGG GGATAATCTT GAAGCCAAGA GTTTTTATTA CACGCAAAAT TCCAGAAGAT 
ATACTTACAT TAATAGAAGA AGTTTGTGAG GTTAAAGTTT GGCCTGAGGA AGACACTCCC
ATTCCGCGCT CTGTTTTGGA GCAGGAAATC CGCGAGGTTG ATGGATTATA CTGTCTGCTG
ACAGAGACTA TAGACGCTTC TTTACTGGAC TTAGGCAAGA ATCTTAAAGT AGTCAGCAAT
ATGGCGGTGG GCTACAATAA TATCGATATC GAAGCGGCAA CACAGCGCAA TATTCTGGTG
ACGAACACCC CGGGAGTGCT GACGGAAACG ACGGCGGATC TTACCTTTGC CTTGCTGATG
ATGACCGCCC GGCGTATGGA GGAGTCGTCC CAATATCTTC GTCAAGGTCA CTGGAAGACA
TGGTCCCCCA TGCTTTTAGC CGGTCAGGAT ATTTTTGGCG CCACGTTAGG GATAGTGGGC
ATGGGGAGAA TCGGCGAGGC CTTGGTCAAG CGAGCGAAAG GCTTTGATAT GAAGATCATC
TATTATAACC GGACCCCCAA GCCGGAGCTG GAAGAAAGCC TGGGGATTGA ATACCGTTCA
CTGGACGAAT TATTGCAGGA AGCGGATTTT GTCTGTATTT TGACCCCCTA TACTCCCGAG
ACCCGCAATC TGATCGGCAA AAGGGAATTG GAGCTCATGA AGCCTACCTC GATACTGATC
AATACGGCCC GGGGAGGCAT AGTGAATGAA GAAGATCTCT ATGAAGCTTT AGCCCAGCAG
AAGATTTATG CAGCCGGCCT TGATGTCTTT GAGCAGGAAC CTTTGCCCAC CGATCATCCC
TTGCTGACTC TGACGAACTG TGTGGCCCTT CCCCATATCG GCAGCGCAAC CGTTAAAACC
CGTCGGGAAA TGGCGCGGCT GGCTGCTCAG AATTTGCTTG CATATTTGCA GGGGCAGCGG
CCGCCACACT GCGTTAATCC CTCTGTTCTC ACCCCTAAAC TATAG
 
Protein sequence
MKRGIILKPR VFITRKIPED ILTLIEEVCE VKVWPEEDTP IPRSVLEQEI REVDGLYCLL 
TETIDASLLD LGKNLKVVSN MAVGYNNIDI EAATQRNILV TNTPGVLTET TADLTFALLM
MTARRMEESS QYLRQGHWKT WSPMLLAGQD IFGATLGIVG MGRIGEALVK RAKGFDMKII
YYNRTPKPEL EESLGIEYRS LDELLQEADF VCILTPYTPE TRNLIGKREL ELMKPTSILI
NTARGGIVNE EDLYEALAQQ KIYAAGLDVF EQEPLPTDHP LLTLTNCVAL PHIGSATVKT
RREMARLAAQ NLLAYLQGQR PPHCVNPSVL TPKL