Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2808 |
Symbol | |
ID | 7259816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 3016078 |
End bp | 3017175 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643562727 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_002459268 |
Protein GI | 219668833 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.387715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTTG ACAATCATTA CATGTCCCGG GCCCTGGAAT TGGCAGCCTT GGCTATGGGC AGAACCAGTC CCAATCCCCT GGTGGGATGT GTCATCGTTA AGGATGGCGC TATTGTCGGT GAAGGATATC ATCAGAAAGC CGGCACTCCC CATGCCGAAG TTCACGCTCT GCAGGCAGCC GGAGAACATG CCCGGGGAGC CACAGCCTAT GTTACTTTAG AGCCTTGTTC TCATTTCGGG AAAACCCCTC CCTGTGCCGA CGCACTGATT AAAGCCGGAA TCCAACGCGT TGTCGTGGCT ATGGTGGATC CCAATCCCTT AGTGGGCGGA CAAGGGATCA CCCGCTTGCG GGCAGCCGGC ATTCAGGTTG ATGTGGGGCT TAAAGAAAAG GAAGCCAGGA CCTTAAACAA GGGCTTTCTA AAGGCCATGC AGACCGGCCT TCCCTTTGTC CTCTACAAAT CGGCTTTAAC CCTTGATGGT AAAATAGCGA CGGAGTCAGG TGACTCCAAA TGGGTTACCA ATGAAGCCTC CCGTGCCTAT GTCCACCGGC TGCGCGATCA CTTCGATGTG ATTATGGTGG GCAGTGAAAC CGTGCGCCAG GATAATCCTG CTTTGAATTG CCGGATTGAC GAAGGCCGTG ATCCGGTGCG CTTGATCGTG GATGGAACAT TGCAAATTCC TCTGCAGGCC GCCGTACTTG CTTCCTCCTG TACCGCCCCC TGTCTCATCG CCACCACGGC CTCCGCTCCT TTGGATAAGC TGAAGGCCTT GCGGGCTCTG GAGAATGTAG AGGTTTGGCA GTATGATTCC CCCCGTTATG TTCCTTTAAA AGACCTGCTG GGAGATTTAG TCAAACGGGG TTGGAACTCT GTATTGCTGG AGGGCGGCGG CGGGCTGGCC GGCTCCCTGC TCCGCGAGCA GCTTATCGAT GAGGTGGAGT TTATCTATGC GCCCAAGCTC ATCGGAGGCA AAGGTCCTTC CCCCCTGACC GGACTTGAGC TTCCTTTGAT GGCACAGGCG ATTCCTTTAG AATTTCTGGA GATCGACGGA GGAACCGGGG ATCTCCGGGT ACGGGCCAAA GTAAATTATG CCGATTAA
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Protein sequence | MELDNHYMSR ALELAALAMG RTSPNPLVGC VIVKDGAIVG EGYHQKAGTP HAEVHALQAA GEHARGATAY VTLEPCSHFG KTPPCADALI KAGIQRVVVA MVDPNPLVGG QGITRLRAAG IQVDVGLKEK EARTLNKGFL KAMQTGLPFV LYKSALTLDG KIATESGDSK WVTNEASRAY VHRLRDHFDV IMVGSETVRQ DNPALNCRID EGRDPVRLIV DGTLQIPLQA AVLASSCTAP CLIATTASAP LDKLKALRAL ENVEVWQYDS PRYVPLKDLL GDLVKRGWNS VLLEGGGGLA GSLLREQLID EVEFIYAPKL IGGKGPSPLT GLELPLMAQA IPLEFLEIDG GTGDLRVRAK VNYAD
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