Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2803 |
Symbol | |
ID | 7259810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3011441 |
End bp | 3012097 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643562721 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002459263 |
Protein GI | 219668828 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000000135531 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAATG AGTCTTTATG GACCCAGATT ATACTTCAGT TGGAAATGCG TTGGCCTGAC TTAACAGCGG CTTTGCTTCA GCACATTGAG TTGGTCTTCA TTTCCATGCT GATTGCCATT ACCATTGGTG TTCCCCTTGG TATTCTGATT ACCCGTGTCA AAGCCTTGGA AGGGCCTGTT CTGGGCGTAG CCGGTATTCT TCAGACTATC CCAGGTCTGG CTTTGCTGGG TTTTATGATT CCTCTTTTCG GGATCGGTAT CAAAACAGCG GTGGCGGCCT TGTTCCTGTA CTCCTTGTTG CCCATTATCC GCAACACCTT TACCGGTATT AAGGATGTAG ATAAAGCGAC CATCGAAGCG GCTAAAGGCA TGGGGATGAC AGATTGGCAG ATCCTTACTA AAGTCCAGCT GCCCCTTGCC CTGAGTGTCA TGATGGCCGG GATCCGCACC GCTACCGTCA TTAACGTTGG TACAGCTACC CTGGCGGCTT TTATCGGTGC CGGCGGTCTG GGGGATTTCA TCTTTATTGG TATATCCAGA AACCTGGATG CCCTGGTGCT GATTGGAGCT TTTCCGGCGG CGTTATTGGC CCTGCTGCTT GATTGGCTGC TGGGCAGGCT GGAAAAAACA ACCACACCAA GGGGGCTGAA GGTGTAG
|
Protein sequence | MRNESLWTQI ILQLEMRWPD LTAALLQHIE LVFISMLIAI TIGVPLGILI TRVKALEGPV LGVAGILQTI PGLALLGFMI PLFGIGIKTA VAALFLYSLL PIIRNTFTGI KDVDKATIEA AKGMGMTDWQ ILTKVQLPLA LSVMMAGIRT ATVINVGTAT LAAFIGAGGL GDFIFIGISR NLDALVLIGA FPAALLALLL DWLLGRLEKT TTPRGLKV
|
| |