Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2772 |
Symbol | |
ID | 7259779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 2974586 |
End bp | 2975569 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643562690 |
Product | Rhomboid family protein |
Protein accession | YP_002459232 |
Protein GI | 219668797 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0134259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTAAAGG AGGGGCTTGT TATCCTCGAG CGCATTATTC AAGGGCTTCA TGAGGATCTC TGGTCCATTG AAAAGGATGG GAATCAGTGG ATTATGGCCC GTAAAGGGGA AAATGGGCTG CTTTTTTCTT TCTTAAGGAA AGGTGCTCCC TTGGAAGGAC CCCAGGGTTC ATTCGCTGCA GATGCTTCTA TAAAGCACTG GGAAGCGATT ATCTTATGTC CGGAAGGTTT GTCTTCCCAG GATTTAAAGC AACCTGCCTT AAAAAGCATC CAAGCCTGGT TTATTGACCT GCAGACGGGT TCTATTTTTG CTGCTCCGGC CACAGCCAAA CGAGAGCATT TAAATAGGGT ATTATCCTAT CTTGAAGTCA ATTCTTCCTC ATCAGCCTCA GTGTATGAGA CTTCAGAATC CACACCCTCT GCCCGGAGCG GCCAAGGACC TCCCTATCTT ACTTACACGC TCATCGCCAT TAACCTGATT GTCTTTGGCC TGATGACCTT AGCCGGAGGC TCAACCCGGA CCGGAGTTCT TATTTTATTT GGGGCTAAAG TCAATGCTCT GATTATCCAG GGTGAATATT GGCGGTTATT TACCAGCATG TTCCTCCATA TTGGTTTTCT TCATCTCGCC TTCAATCTTT ATGCTCTCTG GGCCTTAGGA GCTATCGCCG AAGAATTGCT GGGACGGGTT CGCTATATCA CGGTTTATAT TCTCAGCGGC ATCCTGGGTT CGGTGGCCAG CTTCTTCTTT ACGGATGCCA TTTCGGCTGG GGCTTCCGGA GCCATTTTCG GCATTTTGGG CGCTTTGGTG GTGTATTCCC GCCGCAAGCC CTTTCTCTGG AAATCAGGTT TTGGCAAAAG TCTGGCTGTC GTTGTTTTGA TCAATTTAGG CCTGGGCTTT TTTCAAACCG GAATCGATGT CTATGCTCAT CTGGGCGGTT TGGTGACCGG CATGCTTTTT ACTTGGTTAA TTTCCATGAA ATAA
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Protein sequence | MVKEGLVILE RIIQGLHEDL WSIEKDGNQW IMARKGENGL LFSFLRKGAP LEGPQGSFAA DASIKHWEAI ILCPEGLSSQ DLKQPALKSI QAWFIDLQTG SIFAAPATAK REHLNRVLSY LEVNSSSSAS VYETSESTPS ARSGQGPPYL TYTLIAINLI VFGLMTLAGG STRTGVLILF GAKVNALIIQ GEYWRLFTSM FLHIGFLHLA FNLYALWALG AIAEELLGRV RYITVYILSG ILGSVASFFF TDAISAGASG AIFGILGALV VYSRRKPFLW KSGFGKSLAV VVLINLGLGF FQTGIDVYAH LGGLVTGMLF TWLISMK
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