Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2721 |
Symbol | ddl |
ID | 7259728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 2918089 |
End bp | 2919174 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643562641 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_002459183 |
Protein GI | 219668748 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0289964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGGC AAAAGATTAT TATTCTCTTC GGAGGTCAAT CCGGAGAACA TGAGGTTTCC CTGAACTCTG CCAGTTCTGT ACTTAAGGCC ATCGATCAAG AAAAATATGA GATAGAGACG ATTGGCATTG CCAAAAACGG CCAATGGCAC TGGGGAATAC GTCCTGAACA ATGGCAGCAG GACCCCGCGC TGGAGGGTAT TCCTGTCATT CTTGCCCACG ATCCTACGAA CCCCCGCTTT ATCGCTTTAG ACGGCAGTTC CCTTCCTCAA GATGGGAAGT TTGCTTTGAT TTTCCCCGTT CTTCACGGAC CCTTCGGAGA GGATGGGACC ATTCAGGGCT TGTTTGAAAT GGCCAATATT CCTTACGCCG GCTCCGGAGT TCTCGGCTCC GCTCTGGGTA TGGATAAAGA CCGTATGAAA GCAGTTTTTA CCGAAGCGGG CCTGCCCCAA GCCCCTTATA TCACCGTACT TAGAACCATG CTCCAGAAAC CGATGGAGCA ACTGCTGGAT AATATCGAAC ACTCTTTGGG TTATCCTTGT TTTGTCAAGC CTGCCAATTT AGGCTCCAGT GTAGGCATTT CCAAAGCACG GAACAGGGAG GAGCTCATCC AAGCCCTCCA GCTTGCTGCG GAGTACGATC GCAAACTGGT CGTAGAGCAA AATATCGTGG GACGCGAAAT TGAGTTGAGT GTCCTGGGCA ATGAGGATGC CCAAGCCAGT ATCCCGGGAG AGATTCTTCC CGCCAAGGAT TTTTATGATT ATGAAGCCAA GTACATCGAC ACCGGCTCTC AGCTGGTGAT TCCCGCTCCT TTGGCTCCCG AGGTCGTCAG GAGTTTGCAG GAAAAGGCTG TTGCCGCCTT CAAAGCCGTC GAAGCCTGCG GCTTAAGCCG GGTGGATTTC TTCGTCACGG AGGGCGGTCA GATCTACATC AACGAAATCA ATACCATGCC GGGGTTCACT CAGATCTCCA TGTACCCTAA GCTTTGGGAA GCTAGCGGCA TCCCTTACAC CGAATTGATC ACCCGCTTGA TCGAACTGGG CTTCCAACGC TTTAGAGACA GCCGTTCCCG GAAAATATCC CGTTAG
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Protein sequence | MTRQKIIILF GGQSGEHEVS LNSASSVLKA IDQEKYEIET IGIAKNGQWH WGIRPEQWQQ DPALEGIPVI LAHDPTNPRF IALDGSSLPQ DGKFALIFPV LHGPFGEDGT IQGLFEMANI PYAGSGVLGS ALGMDKDRMK AVFTEAGLPQ APYITVLRTM LQKPMEQLLD NIEHSLGYPC FVKPANLGSS VGISKARNRE ELIQALQLAA EYDRKLVVEQ NIVGREIELS VLGNEDAQAS IPGEILPAKD FYDYEAKYID TGSQLVIPAP LAPEVVRSLQ EKAVAAFKAV EACGLSRVDF FVTEGGQIYI NEINTMPGFT QISMYPKLWE ASGIPYTELI TRLIELGFQR FRDSRSRKIS R
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