| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2693 |
|---|
| Symbol | |
|---|
| ID | 7259700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2899058 |
|---|
| End bp | 2899897 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643562613 |
|---|
| Product | 3-hydroxybutyryl-CoA dehydrogenase |
|---|
| Protein accession | YP_002459155 |
|---|
| Protein GI | 219668720 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 76 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TCATGGTCAT CGGTGCAGGA CAAATGGGTG GTGGCATAGC ACAGGTCGCC
GCCCAAGCGG GTTATTCCGT TATTCTCAAT GATCTTAAAG AGGAGTTTGT GACCCGCGGG
CTGAGTGTGA TTGAGAAAAA CCTGAGACGC AATGTGGAAA AGGGAAAGCT TGAAGCCACA
GAATCTGCAG CAACTTTAGG GCGCATTACC CAATCCACCG CTTTGCAGGA TGCAGCCTCG
GCTGACCTGG TTATTGAGGC AGCCGTAGAA AATATGGTGA TCAAGAGTCA GCTGTTTACC
CAACTGGATG AGATTTGTCC GGAGCATACC ATTCTGGCGA CGAATACATC CTCTCTCCCC
ATAACGGAGA TTGCTGCCTT TACTAAACGT CCTGACCGGG TTATCGGTAT GCACTTTATG
AATCCGGTTC CGGTGATGAA GCTGGTGGAA GTCATTCGCG GCCTGGCCAC CAGCGACGAA
GTCTATAAAA CCATTGAAGC CTTAAGTCAG GAAATGGGAA AAACCCCTGT AGAGGTCAAT
GATGCCCCTG GATTTGTAGC CAACCGCATC TTAGTCCCCA TGATCAATGA GGCGGTTTAT
ACCCTTTATG AAGGGATTGC CACGGTTGAA GATATTGATC AGGTGATGAA ACTGGGGATG
AATCATCCCA TGGGCCCCTT AGCTTTGGCA GATTTAATCG GGTTGGATAC GGTGCTGTCC
ATCTCCGAAA TTCTTCATGA AGGACTGGGG GACAAATATC GTCCCTGCCC GCTTCTGCGC
AAATATGTTA AAGCCGGCTG GTACGGAAGA AAATCCGGTC GTGGTTTTTA CCAATACTAA
|
|---|
| Protein sequence | MKKIMVIGAG QMGGGIAQVA AQAGYSVILN DLKEEFVTRG LSVIEKNLRR NVEKGKLEAT
ESAATLGRIT QSTALQDAAS ADLVIEAAVE NMVIKSQLFT QLDEICPEHT ILATNTSSLP
ITEIAAFTKR PDRVIGMHFM NPVPVMKLVE VIRGLATSDE VYKTIEALSQ EMGKTPVEVN
DAPGFVANRI LVPMINEAVY TLYEGIATVE DIDQVMKLGM NHPMGPLALA DLIGLDTVLS
ISEILHEGLG DKYRPCPLLR KYVKAGWYGR KSGRGFYQY
|
|---|
| |