| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2373 |
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| Symbol | |
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| ID | 7259342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2561644 |
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| End bp | 2563686 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643562258 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002458838 |
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| Protein GI | 219668403 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000104876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTTA CCGAAAAGAG TTTTTCTGAG CAAACATACT GGGAAGAGAT AGCACGATGT
AAAACTCAAT TTGTGAATAA TGGAGAAGAC CCTTTGCTCA ATCCCTATCT GCGCAAGGAA
GTGGCAGAAT CCTGGATCAG ATCAAAAAAC AATGGAGTTT TTCCCTGGAC ATCCTATAGT
AAATACTACC TGACAGAGGA AGAGTGGGGG GTGCTGAAGG AGCAGAATGA GCGGCTTATT
CATATAGCCC AACCTCTGAT CAGCAATTAT TTGGGGCTGG CCTCCACCAA TGGACATTCC
CTGGAACTGT TTGACCCCAG CGGTGCCTTT TTGCTGGGGA TTCATATCAA TATTTCTTCA
ACTCCCGTTC TCTCCATTGT GTTTAATGAA AGTACCACAG GTACCACCGC TCATGGTTTG
GCGACTTATC ACAAGAAACC CTTCCAGTTA ATCGGACCGG AGAACTACCT TGATGTCTGG
CAGAATATGA TCTGTTCTGC AGCCCCTATT TTGGATGAGA TGGGTGAAGT TCTGGGTACT
CTGGCTTTGG TTCAGGATAT GGGGGAAAAA CCCTGGGAAA AGAACCGGTC TAACCTGCAT
ATTCATTCCC TGGGCTGGGT CAGCTCTCTG GCAGAAGCTA TTGGCAACCA GATCAAAATT
CAAAATAGTT ATGATGTTCT CAATCAGGTG AATAACGATT TAAGAAAGGC TACGGAAACC
TTGAAAATTA TCCTGGAATT TATTGACGAA GGGGTGATCA CCATTGAGCC TAATGGGCGG
ATTCTCAGTT CTAATCATGA GGGCAGCAGA ATATTGAATG TGAATCATGG CGAGATAAGA
GGGCGAAACA TTGGGGAGTT TCTGCTGCCC AGGTCGGCGT TAATGGATTA TGTGGCCGAT
AAGAAAACAG TAGATTACAT GGAGGAATAT GTGGTCAATG GCCGGGAAGA GAAGCAGTAT
CTGGTGAGCT TGCGGCCGGT GTATAAGCAA GGCAATGACG AGCTGGATTT TGCCATTCTC
CGTTTTAATC ATTCGGACAA GATCAACGCT CTGGTTAACA CCAGGAGCGG GGCTGTAGCA
AAATTCCGGT TTGAAGATAT TGTGGGGCAA AGCGAAGCTA TGTTAAAAGC GAAGGCTTTA
GCCAGGCGTT TTGCCAGAAC CCGTGAAAAT GTTCTTTTGC TGGGGGAGAG CGGGACAGGC
AAGGAACTTT TCGCTCAAGC CATTCATAAC AGTCACCGCC CGGGAGGGCC TTTTATTGCT
GTGAACTGTG CCGCCATGCC CCGGAATTTG ATCGAAAGCG AGCTTTTTGG CTATGAAAGC
GGCTCTTTCA CCGGGGCGGA GAAAAATGGC CGGCCGGGCA AGATAGAATT GGCCAACGGG
GGAACCCTTT TTCTGGATGA AATCGGCGAT ATGCCTATTG AGTTGCAGGC GGTGTTGCTG
CGGGTTCTGC AGGATAAAAT GGTCATGAGG ATAGGAGGAA GAAATTACCG GCAGGTTGAT
TTCCGTCTGA TAACGGCAAC CAATCAGGAT CTGAAACTCT CAGCCCAAGA AAGGAAGTTT
CGTGAGGATC TCTATTTCAG AATTTCTGTT CTTAATATAG AGATACCCCC TCTGCGCAGC
AGAGGCTTCG ATATTGCCAT ACTTGCGGAG CATTTTATTG AAAATTATGC CAAGCGGGTG
GGACTGCCGG CTGCGGTGAT CAGCCCGGAG GCCAAACGAA GGATTTTGGA ATATAATTGG
CCGGGCAATG TCCGCCAATT GGAAAATGCC ATGATCTATG CCGTGAACTT GTCCGAAGAG
GGTCAGATTA TGCTCAGTCA CTTGCCCAAG GAGTTGAGCG AAAAAAGAAC GGCCTTGCCT
ATGGTCAGTG AAAAGGAGTG TGATAAGCCG GAGGAACTGT TCTCCATGAA GGATCTGGAG
AAAGTGACCA TAAAAAAGGC CTTGGAGAGA GCCGGCAATA GTGTGGCCAT CGCTTCGGAT
TTGTTGGGAA TCAGTAAAAC CACTCTGTAT AGAAAATTAA AAGAACATAA TATTCACTAT
TAA
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| Protein sequence | MIVTEKSFSE QTYWEEIARC KTQFVNNGED PLLNPYLRKE VAESWIRSKN NGVFPWTSYS
KYYLTEEEWG VLKEQNERLI HIAQPLISNY LGLASTNGHS LELFDPSGAF LLGIHINISS
TPVLSIVFNE STTGTTAHGL ATYHKKPFQL IGPENYLDVW QNMICSAAPI LDEMGEVLGT
LALVQDMGEK PWEKNRSNLH IHSLGWVSSL AEAIGNQIKI QNSYDVLNQV NNDLRKATET
LKIILEFIDE GVITIEPNGR ILSSNHEGSR ILNVNHGEIR GRNIGEFLLP RSALMDYVAD
KKTVDYMEEY VVNGREEKQY LVSLRPVYKQ GNDELDFAIL RFNHSDKINA LVNTRSGAVA
KFRFEDIVGQ SEAMLKAKAL ARRFARTREN VLLLGESGTG KELFAQAIHN SHRPGGPFIA
VNCAAMPRNL IESELFGYES GSFTGAEKNG RPGKIELANG GTLFLDEIGD MPIELQAVLL
RVLQDKMVMR IGGRNYRQVD FRLITATNQD LKLSAQERKF REDLYFRISV LNIEIPPLRS
RGFDIAILAE HFIENYAKRV GLPAAVISPE AKRRILEYNW PGNVRQLENA MIYAVNLSEE
GQIMLSHLPK ELSEKRTALP MVSEKECDKP EELFSMKDLE KVTIKKALER AGNSVAIASD
LLGISKTTLY RKLKEHNIHY
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