Gene Dhaf_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2358 
Symbol 
ID7259327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2546021 
End bp2547880 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content51% 
IMG OID643562244 
ProductABC transporter related 
Protein accessionYP_002458824 
Protein GI219668389 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.555356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGC ATCAAACCAG AACACAAAAT GGCGGCCCCA TGGGTGGGCC GGCAAGTGGC 
CCACCCATGG GCGGCGGCGA AAAAGCCAAG GATTTCCAAG GAACATGGGG CAAGCTGATC
CGCTACTGTA AAGGCTACAT GCCCGTCATT ATCACCGCCC TTGTCATCGC GGCTTTGGGG
ACACTCCTGC AAATCATCGG TCCGGACCAA CTGAAGAACA TGACCAATGA GATCACCAAG
GGGCTGCCGG CCCTGATCAA CGGAGTACCG GTGTCTGGGG CCATCGATTT TAACGCGGTC
TTCAATATTG GTATGCTGCT TGTCTGTTTC TATGCAGCCT CAGGTATCTT CAGCTTTGCC
GAGAATTTTA TCATGGCTAC GGTAACTGCT AAAATATCTA AAAGCATGCG CACTGACATC
GCCAAGAAGA TCAACAAACT GCCCCTCAAA TACTTTGACA AAACAAGTTA CGGCGATGTC
ATCAGCCGCG TGACCAACGA TGTTGACGCC ATTGGCCAAA CCCTCAATCA GAGCCTCGAT
AATTTGGTGA GGGCAGTTAC CATGTTTGTC GGTTCCCTGA TCATGATGTT CTACAACAGT
TGGATTCTGG CCTTGGTTGC CATCGGCTCC ACTTTGATCG GGTTTGTTCT GATGGCGCTC
ATCATGTCCA AATCTCAAAA GTATTTTACC GTGCAGCAGC AGGGACTCGG CGATATCAAT
GGCCATATTG AAGAAATCTA TTCGGGCCAC AATGTTGTCA AGGCCTATAA CGGCGGCAGC
AAGGCGAAAA AGACCTTTGA GGAGATCAAC ACGTCCCTGT ATGACAGCGG TTGGAAATCT
CAATTTATGT CGGGGATGAT GATGCCGATT ATGGGCTTCA TCGGCAACTT CGGCTATGTG
GCGGTGTGCG TGGTCGGCGC GGCCTTGGCT ATGAAAGGCA CGATCTCCTT CGGCGTCATC
GTTGCCTTTA TGATCTATAT CCGCCTCTTT ACCCAGCCTT TGTCCCAGTT GGCTCAATCT
ATGCAGCAGC TGCAAAGAAC AGCCGCCGCC AGTGAGCGTG TCTTTGAATT CTTCGCCGAA
GAAGAGTTGG CCGGGGAAAG CCAGCAGCTC AAAAAGCTGG AGAATGTCAA AGGCCACGTG
GAGTTTCAGA ATGTTCACTT TGGCTATGAG AAGGACAAAA CCATTATCAA TAATTTTTCC
GCTCAGATCA GAGCCGGCCA GAAGGTCGCC ATTGTGGGGC CTACCGGTGC GGGAAAAACG
ACCATGGTCA ATCTGCTGAT GCGCTTTTAC GAAATCGACA GCGGCGAGAT TCGCATAGAC
GGTATCCCCA TCAGCCATGT GAGCAGAGAA AACGTCCATG ACCAATTCTG TATGGTATTG
CAGGACACCT GGCTCTTTGA GGGAACTATC AAAGAAAACA TCATCTACAA CAAGCAGGGC
GTTACCGATG AAGAAGTGAT CGCCGCCTGC AAGTCTGTGG GCATCCACCA CTTTATCCGC
ACCCTGCCCC AGGGCTATGA CACCATCCTC AATGATAAAG CCAACCTGTC GGCAGGCCAA
AAGCAGCTTG TGACCATTGC CCGCGCGATC ATTCAAAATT CACCCCTTCT GATCCTGGAT
GAAGCGACCA GCTCGGTAGA CACCCGTACG GAAAGGCTCG TACAGGATGC CATGAATAAG
CTGACCCAGG ACCGAACCTC ATTTGTGATC GCCCATCGCC TCTCCACCAT CAAAGATGCC
GATCTGATTT TGGTGATGAA AGACGGCGAC ATCATCGAAA GCGGCGATCA CGAGGAACTC
CTCGGCAAAG GCGGCTTCTA CGCCGAGCTT TATAACAGCC AATTTGAACA GGCTTCATAA
 
Protein sequence
MSEHQTRTQN GGPMGGPASG PPMGGGEKAK DFQGTWGKLI RYCKGYMPVI ITALVIAALG 
TLLQIIGPDQ LKNMTNEITK GLPALINGVP VSGAIDFNAV FNIGMLLVCF YAASGIFSFA
ENFIMATVTA KISKSMRTDI AKKINKLPLK YFDKTSYGDV ISRVTNDVDA IGQTLNQSLD
NLVRAVTMFV GSLIMMFYNS WILALVAIGS TLIGFVLMAL IMSKSQKYFT VQQQGLGDIN
GHIEEIYSGH NVVKAYNGGS KAKKTFEEIN TSLYDSGWKS QFMSGMMMPI MGFIGNFGYV
AVCVVGAALA MKGTISFGVI VAFMIYIRLF TQPLSQLAQS MQQLQRTAAA SERVFEFFAE
EELAGESQQL KKLENVKGHV EFQNVHFGYE KDKTIINNFS AQIRAGQKVA IVGPTGAGKT
TMVNLLMRFY EIDSGEIRID GIPISHVSRE NVHDQFCMVL QDTWLFEGTI KENIIYNKQG
VTDEEVIAAC KSVGIHHFIR TLPQGYDTIL NDKANLSAGQ KQLVTIARAI IQNSPLLILD
EATSSVDTRT ERLVQDAMNK LTQDRTSFVI AHRLSTIKDA DLILVMKDGD IIESGDHEEL
LGKGGFYAEL YNSQFEQAS