Gene Dhaf_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2338 
Symbol 
ID7259307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2524243 
End bp2526897 
Gene Length2655 bp 
Protein Length884 aa 
Translation table11 
GC content50% 
IMG OID643562225 
Productmolybdopterin oxidoreductase 
Protein accessionYP_002458805 
Protein GI219668370 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTC TCCTCAAGAA AATAGCCGAC AAACAAATAA GCCGCAGAAC GTTCCTGGCC 
GCTACCGCAG CCGGAACTGC CGGCTTGGCG CTTGCGGGCT GCAGTGGTAA TATCCTCACC
CCCGCAGGAG CCAATCTTGA TACAGCAAAA GAAGGCAAAT GGGTCTCAGC CACTTGCTGG
CATAACTGCG GCGGCCGTTG TGTCAATAAA GCTTATGTGG TGGATGGGGT CATTGTCCGG
CAGAAAACCG ATGATACCCG CCCAGACACA CCAGATGCTC CCCAGCAAAG AGGATGTCTG
AGAGGGCGCT CACAAAAGCA TCAGGCCCAA GGTGTGGACC GTTTGAAATA CCCTATGAAG
AGAAAAAACT GGGAACCAGG CGGCGGTAAA AAGGAACTGC GCGGCCAGGA CGAGTGGGTG
CGGATTTCCT GGGATGAAGC TCTGGATATT CTTACCAGCG AACTGCAACG CATCAAAGGT
GCTTATGGCA ATGCTTCCAT TCTTGTTCCG GGAGAAGCGA ACAGTGAAGT TATGAATTTA
ATGAGTATCT ACGGTGGTTT TGTTCCCTCT TGGGGGACGA TGTCCTTTGG CTCCTGGTTC
ATAACCCCTC ATATTATTGG TTTCGCTGAT AATTTATTCG ATCCCAAAGC CCTTAACGAC
CGTTTTGATA TGCGAAAAAC CGATCTTGTC GTTGCCTTCG GCATCAATCC GGCCTGGAGT
TCCCTGGGTA ATCCTATGTA TCATTTCCTG CAAATGAAAG AAGCCGGTAC AAAATTCATT
ATTATTGACC CCTTTTATAC TGATACTGCT GCCACTTTAG AAGCCGAATG GATTCCGATC
AAACCGGCCA CAGACATGAC CTTGCTCCTG GCTATGGCCT ATACCCTAAT CGTCGAGGAC
GATCCGGTCA ATAAACCTTT AATCGATTGG GATTTCCTCA ATCGCTGTAC TGTAGGGTTT
GATGTTGAGC ATATGCCGGC AGATGCCGAA ACCAATGAAA ACTTCAAGGA TTATGTCTTG
GGCAAGTATG ACAATATCCC CAAAACCCCG GAATGGGCTT CGGAAATCTG CGGAATAGAC
CCTCACACCA TTAAGTACCT GGCCCGGGCC ATCGGCATGC AGAATAAGGT CAGTATCCTG
GCCAGCTGGG CATCCGGGCG AGCTCAGAAT TCCGACAATC TCCCCCAGAT GTTTATGACT
CTGGGGGCCA TGACCGGACA TTTCGGCAAA TCCGGCCATA TGACCGGTGC CTCCTGCTGG
AACTATGCAG GCAACCCCGG TCCCGCCCTT GTCAACCCTG GCGGCAGCGG CGAACCATTT
CTGGGCAGCC CCTTGAAAGA AGTCCTCTGT GAAGCAGACA TGTGGACCGG CCTTCTCCGC
AAAAAATATC TTCCCAATAG TATCATGAAA ACCATCAAAT ATTCCCCGCC GACTTGGCAG
GACACCGTCA AAGGAGTGGA TCTGAAGACT CGTGTGCAAG AGGAGGATAT TAATATCCAA
ATGATTTGGC ATACTTCTGA AGCCACCCTG CAAACCCGGG ATGGGATGAA CAAAGGAATC
GAGGCTCATC GGGCCGTGGA GTTCGTCGTC AGCCAATCCC ATTTCCTAAC CACCAACTCG
AAATATGCCG ATCTGGTCCT GCCCGTTACC ACCTTGTGGG AAAGAGCCGG CGATATCGAT
GGCTTGTTCA GCAACCGCGA TGTGCTCATT GTCTCTTCCC AAGTCATTGA ACCCATTTTC
GAGGCCAAAG ATGATAACTG GATTGCTGTG GAGGTAGGCA AGCGCTTAGG ATTGGATGTT
TCCCAAATAG TTGTCAGCGA CCGCAAGCAG CAGCTCTTTA ATAAACTGGC TGGCTCCACG
GTGGTAAAAG AAGACGGCAA AACCTTTGAA CCTTTAGTAG ACATCACTGC TGAGGATATT
TCTGAATGGG GAGTTTCGGG ACAGCCTCAA ACAGGACGCA TTCCCCTGAC GAAGCTCCTT
GAAGATGGTG TCTATCAGGT AGAACGTCAT GAGGGAGACA ATTATGGCTT TATTGCTTAT
GAAGATTTCC GCAAGGATCC CGAAAAGAAC CCTGTCAATT CAGTCAGCGG CAAGCTGGAA
ATCTACAGCC AAACCCTTGC CGATATCATA AATAACCTTG GTTACACGAA AATTTCTCCC
TACCCCAAAT ATGTCCCGCC CATCCAAGGG TACGAAGCTA CCTTCTCTGA TTGGCAAAGC
AAGGCCAAAG GGGCTTATCC CTATCAGTTG ATTACGCCCC ATTACCTTCG CCGCTCTCAC
TCCATCTTTG ATAATATTCT CCAGCTAAGA GAGGCCTGCC CCAACCCGGT ATTCCTGTCA
GCTCAGGATG CCGCAGCAAA GGGGATCAAG GACAAAGATA CCGTTCTCAT CACCAGCGAA
TTCGGCCAAG TCCTGCGCAA CGCCTGTGTC ACCGAACGTC TGGTTCCCGG CGTTGTCGCC
CTCCCCCATG GTTCTTGGTG TGATGTGGAT GAAAAAACGG GCATCGATCA TGGCGGAGCA
GACAATATCC TTTCCGGTAA CGTCCCCACC GGTCAAGGAT TGTCCGGCTG GAATACCTGC
AATGTGAATT TAGAAAAATG GACCGGTGCG CCGCTTATTC CAGATGTAGA AAAACCGCAG
AGAATCTTTT CCTAG
 
Protein sequence
MASLLKKIAD KQISRRTFLA ATAAGTAGLA LAGCSGNILT PAGANLDTAK EGKWVSATCW 
HNCGGRCVNK AYVVDGVIVR QKTDDTRPDT PDAPQQRGCL RGRSQKHQAQ GVDRLKYPMK
RKNWEPGGGK KELRGQDEWV RISWDEALDI LTSELQRIKG AYGNASILVP GEANSEVMNL
MSIYGGFVPS WGTMSFGSWF ITPHIIGFAD NLFDPKALND RFDMRKTDLV VAFGINPAWS
SLGNPMYHFL QMKEAGTKFI IIDPFYTDTA ATLEAEWIPI KPATDMTLLL AMAYTLIVED
DPVNKPLIDW DFLNRCTVGF DVEHMPADAE TNENFKDYVL GKYDNIPKTP EWASEICGID
PHTIKYLARA IGMQNKVSIL ASWASGRAQN SDNLPQMFMT LGAMTGHFGK SGHMTGASCW
NYAGNPGPAL VNPGGSGEPF LGSPLKEVLC EADMWTGLLR KKYLPNSIMK TIKYSPPTWQ
DTVKGVDLKT RVQEEDINIQ MIWHTSEATL QTRDGMNKGI EAHRAVEFVV SQSHFLTTNS
KYADLVLPVT TLWERAGDID GLFSNRDVLI VSSQVIEPIF EAKDDNWIAV EVGKRLGLDV
SQIVVSDRKQ QLFNKLAGST VVKEDGKTFE PLVDITAEDI SEWGVSGQPQ TGRIPLTKLL
EDGVYQVERH EGDNYGFIAY EDFRKDPEKN PVNSVSGKLE IYSQTLADII NNLGYTKISP
YPKYVPPIQG YEATFSDWQS KAKGAYPYQL ITPHYLRRSH SIFDNILQLR EACPNPVFLS
AQDAAAKGIK DKDTVLITSE FGQVLRNACV TERLVPGVVA LPHGSWCDVD EKTGIDHGGA
DNILSGNVPT GQGLSGWNTC NVNLEKWTGA PLIPDVEKPQ RIFS