Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2308 |
Symbol | |
ID | 7259277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 2492425 |
End bp | 2493321 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643562195 |
Product | Substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_002458775 |
Protein GI | 219668340 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00541806 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC AAAAATCTTG GCCCAAAGCC CTCTTCTGGG CGCTGACAGC TCTGCTCGCC ATTGGGCTGA CCGGCTGTGG AGCAGCCCCC GGCAGCCCAT CCGGCAATAA AAAGACCAAC GGCAGCGACA AAACGGTCAA TATCGGCTAT GTTAACTGGG CGGAAGCCGT AGCCGTCAGC AACCTCTGGA AAGTTATCCT GGAAGAACAA GGTTATAAAG TAAAGATGAC AAGCCTTGAT GCCGCTCCCC TCTTTGTGGG ACTCTCCGCA GGAAATTTAG ATATCTTCAT GGACAGCTGG CTCCCCACTA CTCATCAAAT TTTCTGGGAT AAATATAAAA ACAAGCTGGA TGATTATGGC GTGTGGTATA CTGCTGAAGC AAAAATCGGC CTTGTGGTTC CTGAGTATGC GGAGATCAGC TCCATCGAAG AATTGAACGC CCACAAAGAC AGGCTCAGCG GCAGAATTAC GGGGATTGAT CCCGGTGCCG GAATTATGAA AGCTACTGAA ACTGCTATTG ACAGCTATAA CCTGGATTTT AACCTGATTC AAAGTTCTGA AGCCGCTATG CTGGCCGCTT TAGACAAAGC CTATCGCAAC CAGGAATGGA TTGCCGTTAC CGGTTGGAGC CCCCATTGGA AATTCGCCAA ATACGATTTA AAATACCTTG AAGATCCAAA GGGCAGCTAT GGCCAGTCTG AACAGATTCA CACTTTGGCC AACAAGGAGT TTACCCAAGC TCATCCCGAA GTCGCGGCAA TGCTCAAGAA ATTTGAGCTC AATGATCAAC AGATCGGTAC CTTGGAGGGT TATATTAACG AGGGTATGAA ACCTGAAGAA GCGGCCCAAA AATGGATGGC TGAGAATCGG GACTTAGTGG ACAGCTGGCT CAAATAG
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Protein sequence | MKIQKSWPKA LFWALTALLA IGLTGCGAAP GSPSGNKKTN GSDKTVNIGY VNWAEAVAVS NLWKVILEEQ GYKVKMTSLD AAPLFVGLSA GNLDIFMDSW LPTTHQIFWD KYKNKLDDYG VWYTAEAKIG LVVPEYAEIS SIEELNAHKD RLSGRITGID PGAGIMKATE TAIDSYNLDF NLIQSSEAAM LAALDKAYRN QEWIAVTGWS PHWKFAKYDL KYLEDPKGSY GQSEQIHTLA NKEFTQAHPE VAAMLKKFEL NDQQIGTLEG YINEGMKPEE AAQKWMAENR DLVDSWLK
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