| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2297 |
|---|
| Symbol | |
|---|
| ID | 7259266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2481070 |
|---|
| End bp | 2481828 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643562184 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002458764 |
|---|
| Protein GI | 219668329 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000105695 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTAG ATTGGATCAT ACGCATTTTG ACTGAAAACT GGCCCATGTT TCTGCGCGGA
GCAGGGTTCA CCCTTTTAAT CTCCATCATC GGTACCATCA TTGGCTCTCT CATCGGACTT
ATTATCGGTG TTATACGCAC TATCCCCATG CCGGAACGGG GAATTAAACG CATTTTACTG
AAAGTGGTCA ATGCTCTTTT GGCAAGCTAT ATTGAGTTTT TCCGGGGAAC CCCCATGATC
GTTCAGGCTA TGGTTATTTA TTATGGGTCC GCCTTAGCTT TTGACATCCA TATGAATCAT
ATCTTTGCGG GAATTTTTAT CGTTTCTATT AATACCGGGG CCTATATGGC CGAGATCGTC
CGCGGCGGCA TTATATCCAT TGACAAAGGA CAATTTGAAG CAGCCCATGC CATCGGCATG
AACCATATCC AGACTATGTT CAATGTGGTA TTGCCTCAGG TTATCCGCAA TATTCTCCCG
GCTACAGGCA ATGAATTTGT GATCAATATT AAAGATACCT CTGTTCTCAA TGTGATCTCC
GTTACGGAAC TGTATTTCCA AACCAAGTCC ATCGCCGGGA ATAACTTCCG CTACTTTGAA
GCCTTCTTTG TGGCCTGTAT CCTCTACTTC ATTATGACCT TTACGGTAAC GCGCATTCTT
CGTTATATTG AAAGAAGGAT GGATGGACCG GAAAGCTACA CTATGAATCA AATGCAGGTG
CAGACTGCCG AAAGTATGCT GCGCAGAACC AAGACCTGA
|
|---|
| Protein sequence | MSLDWIIRIL TENWPMFLRG AGFTLLISII GTIIGSLIGL IIGVIRTIPM PERGIKRILL
KVVNALLASY IEFFRGTPMI VQAMVIYYGS ALAFDIHMNH IFAGIFIVSI NTGAYMAEIV
RGGIISIDKG QFEAAHAIGM NHIQTMFNVV LPQVIRNILP ATGNEFVINI KDTSVLNVIS
VTELYFQTKS IAGNNFRYFE AFFVACILYF IMTFTVTRIL RYIERRMDGP ESYTMNQMQV
QTAESMLRRT KT
|
|---|
| |