Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2239 |
Symbol | |
ID | 7259208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 2417250 |
End bp | 2419574 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643562127 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002458707 |
Protein GI | 219668272 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAGCA TGCTGCAGAA GAAAGTTCTT CGGGATACAA AGGAGAATCG CTGGTCCTTT CTGGCTATCG TATGCATTTG TTCACTAGGA ATTGCCCTGT TCAGCGGCAT CAACATGTAT GTGACTACGG TCGAAGCCGC GGTATCCGAT GCCTATAAGC AGGCAAATCT TGCTGACTAC TGGATTTATA AAGGGGAAAT TTCTCCTTCC CATTTGGCTG ACCTACGGTC TTTGGAGGAA GTTCAAGAGG TTCAGCGGCG GAAAGTAACC GACATCACTC TCCCCGGAAC CCCAGGGGCG GTGCTTCATC TGCACGCACT GGATGAAACA GCCACCATCA ATGTGCCGGA GCTTCTGGAA GGCAGCGGAC TGGATGGGAG TGAAGCCAAC GCCCTTTTGC TGGACAGCCG CTTTGCTGAG GCTCATGGAC TGTCTGCCGG CGACAGAATT ACGGCAGGAG AAGGGGAAAA ACAGACAAAG TGGCTGATCC AAGGGATTGT CCGTGCCGGG GAATACATTT ATTACGCGCC GGAAGGCTTA ACCGTTCCCG ACTACCAAAA ATATGGCTTC GCCTACACCA ATGCTTCCTC TTTGCCGGAG GTTCCTTTCA ATGAAATCAT CCTCACTGTT GCTGAAGGCT CAACTCTTGC ACAGGCGGAA GTTTCGGCCC AAATACGGGA AAGGCTGGCC GGAGCCAATA TCCTCAGCCG CCACCATCAG ACAAGCTACC GGAAGGTTGC GGATGCTATG ACCGGGATCA AACAAATCGG CCTGCTGTTT TCCCTGGCTT TTTTCCTGAC AGGGGCCCTG GTGACTTGGA TTACAGTATC CAGAATGCTG GAGAACCAAC GCCAGCATTT GGGAACCCTT CGTTCTTTAG GCTACTCCAA AAAGGAAATT ACAGGGAGGT ATGCGCTTTT TGGGGTTTTG ATCACCCTGC CCAGCATGAT TTTAGGCTGG ATGATGGCCC GCTATCTGAT TGCGGAATTT TTGTACAGGA TTGGCATGAC CTATTACACC ATCGAAGCTA CCGGTGTCAT CCCCTTTACG CCCCACTTCT TCCTGTCGGC CCTCTGTGTG GCGGCGGTTA CCTGCGGCGG GGCCCTCCTC TCCTGCCGCA GATCATTGAA GCTGACACCG GCTGCTCTGA TGAGACCCAA GCCACCGGCT CAAGGACACC GGATTTTTCT GGAGCGAATC ACTCCTTATT GGCGCAGACT CAGCTTCAGC GGCAAAATCG TGACAAGGAA TCTGTTCCGC AACAAAGGCC GGATGCTCAT GGGGCTTGTC GGCATTATCG GCTCCACTTC CCTGATTTTG TGCGGCTTCA GACTGATGAA TTCCATTAAC GGGATGCTTG ACAGGGCCTT TAAGGAAACG GTTCACTATG ACGTGGAAAT CAAACTCCGT ACTCCAGCCA CTGTCGAAGG GCTTGCTGAT ATTTATAATA CATTGAGCAG CGGGCAGCAT GTGGACGCCA CCATGGCTCT CAGTGTCTAT CTCTATGGGA AAGAGGGGGA TGTACAAAGC CCTTATCTTG TGGTGATGGA CGAAGGGCAA AAAAGCCTCA ACTTCAAGGA TACAAAAGGT AAGGAGATTC CTTTACCTGA GGAGGGAGCC TTGATTACTC TCAGAATGGC CAAGGCTCTG GCTGTGGACA TAGGGGATAC CCTCAGAGCG GAAAGCCTGG ATGGAACGGT CATGGCCCTG AAGGTTGCTG ATATTGTAGA TTTCCCTGTG GGTAATGAAA TCTACCTATC CAAAACCGCC TTTGCCAAGG TATCCGCTCT CCCCTTCCTG GTCAGAACCC TTCTCATACA GGGCCGGGAT CTTGATTTAA GCAAGCTGAA CAGCGATCCG AGAATTTCCC TGGTGGAAAC AAAGGAAGAA ATGCGCAGCA ATATGCTGAT TGTTTTGGAA AGCCTGCAAA GCTTTCAAAT GATCTTGATT TTATTTGCGG GCTTGCTGGC CTTTGCCGTT ATGATGGTCC TGGGCCGGAT GAACTACTAT GAGCGAATCC GCGAGCTTGC GACTCTGAAA GTCCTGGGGT TTTATGAAAA TGAGATGAAA AGGCTGGTAT TGCGCGAAAC CATCTGGATT ACCGTATTCG GCCTGCCTTT CGGCTACATC CTGGGCTCTT TGCTGCTGGG CGTCATTGTT GACCAGGCCA CAACGCCGGA CTTGGAAATT CTGCCCATGA TTGATCTTTC CAGCATTGCT GTGGGGTTCG CTTTCATGCT GGGCTTTACC ATGCTTGTAA ATTTCATGAT GGGGAGACAA TTCAAAAAGG TCGATATGGT GGCATCCCTG AAAAGCGTGG AGTGA
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Protein sequence | MVSMLQKKVL RDTKENRWSF LAIVCICSLG IALFSGINMY VTTVEAAVSD AYKQANLADY WIYKGEISPS HLADLRSLEE VQEVQRRKVT DITLPGTPGA VLHLHALDET ATINVPELLE GSGLDGSEAN ALLLDSRFAE AHGLSAGDRI TAGEGEKQTK WLIQGIVRAG EYIYYAPEGL TVPDYQKYGF AYTNASSLPE VPFNEIILTV AEGSTLAQAE VSAQIRERLA GANILSRHHQ TSYRKVADAM TGIKQIGLLF SLAFFLTGAL VTWITVSRML ENQRQHLGTL RSLGYSKKEI TGRYALFGVL ITLPSMILGW MMARYLIAEF LYRIGMTYYT IEATGVIPFT PHFFLSALCV AAVTCGGALL SCRRSLKLTP AALMRPKPPA QGHRIFLERI TPYWRRLSFS GKIVTRNLFR NKGRMLMGLV GIIGSTSLIL CGFRLMNSIN GMLDRAFKET VHYDVEIKLR TPATVEGLAD IYNTLSSGQH VDATMALSVY LYGKEGDVQS PYLVVMDEGQ KSLNFKDTKG KEIPLPEEGA LITLRMAKAL AVDIGDTLRA ESLDGTVMAL KVADIVDFPV GNEIYLSKTA FAKVSALPFL VRTLLIQGRD LDLSKLNSDP RISLVETKEE MRSNMLIVLE SLQSFQMILI LFAGLLAFAV MMVLGRMNYY ERIRELATLK VLGFYENEMK RLVLRETIWI TVFGLPFGYI LGSLLLGVIV DQATTPDLEI LPMIDLSSIA VGFAFMLGFT MLVNFMMGRQ FKKVDMVASL KSVE
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