| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2235 |
|---|
| Symbol | |
|---|
| ID | 7259204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2414422 |
|---|
| End bp | 2415600 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643562124 |
|---|
| Product | Rubrerythrin |
|---|
| Protein accession | YP_002458704 |
|---|
| Protein GI | 219668269 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1592] Rubrerythrin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00102881 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCAA TTAGAAATAT TGATCTCTGT ACCAAGGATT GCCTGTGTCT TTATGTTTGC
CCGACAGGAG CAACCGATAC AGAAACAGGT CAGATTGACC CTGACAAATG CCTGGACGGA
TGCCGGGCCT GCGTCGACGC CTGCCCATCC CACGCCATAT CCTTTGTGCC TGAGGTATAT
CCTCCTCAGC AAGGAAAATC CCCTTCGGTA AAAAGAGCCA TGTTATCTTT ATCGGCAAGT
AAAACCAAAC AGGAAAAGAT CGCGGCCCAA GTGGCGGAGC GATCAGGCAG CCCGATTTTG
CGGCAGTTTG CCGAAGCCTT AAGCGCCTCC AACCGGCTCA TGGCCGAAGA TATTCTGCGT
GAAGCCGGGT ATCTGCTGCC TCAGAGCGTC AACGCTCAGG ATTTTCTTCA ATCCTTGCTG
GACAGCCCCC AAGGGGAGGA TTTTCCCAGG GAAGCGGCGG CAAGATTATT AGCGAAACTG
AAAACCAATC AGGCAAAAGG GCAGGAGGAG AAAAAAATGA CTCACTATCG TTGTTCAATT
TGTGGTTACC TTCATGAAGG AGAATTAACC GCGGACTTTA AATGTCCAAT CTGTAAACAA
CCCGCTTCCG TATTTCAACT GGTAGAAGAG AAGGGGAGTG CAGGCAATCC TTACGCCGGC
ACCAAAACAG AGAAAAATCT TCTGGACGCC TTTGCCGGAG AAAGCCAGGC CAGAAATAAA
TATACTTATT TCGCCGCCAT AGCCCAAAGA GAGGGATACG ATCAAATTGC CGAACTCTTT
TTGCATACGG CAAGGAATGA GCAGGAACAT GCCCGCATCT GGTATGAAGA GCTGGGCAAT
CTGGGCAGGA CCGCCGAAAA CCTTTTGCAT GCGGCTGAAG GGGAAAACTA TGAATGGACG
GATATGTACG ACCGCTTTGC CAAGGATGCT GAAGCGGAAG GGTTCAAGGA TTTAGCGGCA
AGATTCCGCA AAGTGGGTGC TATCGAGAAA GCCCATGAAG AAAGATACCG TGCCTTGCTG
AAAAACGTGG AAATGCAGCA GGTCTTTGCC AAAGGGGAAG AAGCCATGTG GGAATGCCGT
ATCTGCGGGC ATCTTGTCAT GGGCAGGAAA GCCCCCGATG TTTGCCCGGT ATGTAAGTAT
TCCCAGAGTT ATTTTGAAGT AAGAAAAGAA AACTATTAA
|
|---|
| Protein sequence | MPAIRNIDLC TKDCLCLYVC PTGATDTETG QIDPDKCLDG CRACVDACPS HAISFVPEVY
PPQQGKSPSV KRAMLSLSAS KTKQEKIAAQ VAERSGSPIL RQFAEALSAS NRLMAEDILR
EAGYLLPQSV NAQDFLQSLL DSPQGEDFPR EAAARLLAKL KTNQAKGQEE KKMTHYRCSI
CGYLHEGELT ADFKCPICKQ PASVFQLVEE KGSAGNPYAG TKTEKNLLDA FAGESQARNK
YTYFAAIAQR EGYDQIAELF LHTARNEQEH ARIWYEELGN LGRTAENLLH AAEGENYEWT
DMYDRFAKDA EAEGFKDLAA RFRKVGAIEK AHEERYRALL KNVEMQQVFA KGEEAMWECR
ICGHLVMGRK APDVCPVCKY SQSYFEVRKE NY
|
|---|
| |