| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2220 |
|---|
| Symbol | |
|---|
| ID | 7259189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2398123 |
|---|
| End bp | 2400771 |
|---|
| Gene Length | 2649 bp |
|---|
| Protein Length | 882 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643562109 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_002458689 |
|---|
| Protein GI | 219668254 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases)
[COG3688] Predicted RNA-binding protein containing a PIN domain |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TGGTCATTGG CCTATGTGCC CATGTGGACG CGGGCAAGAC AACCCTATCG
GAAAGTATGC TTTACTTGAG CGGTGCCATT CGCAAAATGG GCCGAGTGGA TAATAAAGAC
GCTCATCTGG ATACCTTCGA ACTGGAACGG GCCCGAGGGA TTACCATCTT TTCCAAACAG
GCCCTACTGG AAGTGGCTCA TACTCAAATC ACTTTATTGG ATACCCCCGG TCATGTGGAT
TTTTCCCTGG AGATGGAAAG AACCCTCCAG GTGCTGGATT ATGCCGTTTT GGTGATCAAC
GGGGCCGATG GGGTACAGGG TCATACCAGA ACCTTATGGC ACTTGCTGGA TATTTATCAG
ACACCGGTCT TTTTATTCAT CAATAAAATG GATCAGGTGG GCACAGACAG AGAAAAGCTG
ATCAATGAAT TAAAAAGCCA ACTCAGCGAC GGCTGCATTG ACTTTGGACA ACCTGAATCC
ACTGATTTTT ATGATCAATT GGCCATGTGT GATGAAATGC TGCTGGACGC CTATGTGGAT
ACGGGACATA TTGAGCTTCC CCTGATCAGG GAAGGGATTA GGAAGCGTAA AGTGTACCCC
TGCTTTTTCG GTTCCGCTTT AAAGCTGGAG GGTGTAGAGG AATTGCTTCA GGGTATTGTG
GACTATGCTC ATCTGCCGGC CTATCCGGAA AGCTTTGGGG CTAAAGTATT CAAAATAGGC
AGGGACGAAC AGGGCAATCG CCTTACCTAT CTGAAGATCA CCGGCGGAAG GCTCAAGGTA
AGGGAGAGTT TAAGCAATGG TGTATGGGAA GAAAAGGTTA ACCAGATTCG CATCTATTCC
GGGAAGAAAT TCGAGGCAGT CAATGAAGTG GAAGCCGGTT CGGTCTGTGC GGTAACAGGG
CTTACGCTAA CCAAACCGGG AGAAGGCTTA GGCACAGAGA CCGCCGCCCA CTCCCCTTTA
TTGGAACCCG TATTGGCTTA TCAGATGATC CTTCCGGAAG GCTGTGATCC CCGGGTGATG
ATGCCTAAGC TGCGCCAGCT GGAGGAAGAG GATCCGGGCC TGCAGGTGGT CTGGGACGAA
GAGCTCAGGG AGATCCAGGT GCAGATGATG GGTGAGGTCC AGCTGGAAAT CCTGCAAAGC
CTGATCCGGA GCCGGTTTGG CCTGGAGGTG TCCTTCGGAT CAGGGAGGAT TGTTTATAAA
GAAACCATTG GCAATGCTGT GGAAGGAGTA GGGCATTTTG AACCCTTGCG GCATTATGCG
GAGGTCCACC TATTAATGGA GCCGGGTGAG CGGGGAAGCG GCCTTCAGTT CGGAGCGCAA
TGCAGTGAGG ATAGCTTAAG CAAAAGCTGG CAAAGACTCG TTTTATCTCA TCTGGAAGAA
AAAGTTCATA AGGGTGTTCT CACAGGGTCA CCGATTACCG ATCTAAAAAT CACTTTAGTG
TCAGGCCGGG CCCATACCAA GCATACAGAC GGCGGCGACT TCAGAGAGGC CACCTACCGC
GCGGTGCGTC AGGGGTTAAT GGAAGCGGAG TCCATCCTGT TGGAGCCTTA TTATGCTTTT
CAGCTGGAAT TGCCGGAAAA AATGGTGGGA CGGGCCATGA ACGATGTGGA AAAAATGCAT
GGAACCTGCC AGCTTGCCCG GATAGAAGGG GAGCGGGCAA CTCTTACCGG CAGTGCCCCC
GTGGCGACAA TGAGAAACTA TCAGCAGGAG GTCATGGCTT ACAGCAAAGG TCTGGGCAGG
CTTTTTTGCA GCCTGAAGGG TTATGAACCC TGCCATAATC CGGATGAGGT CATAGCTATG
GCCGGGTACG ACCCGGAAAG GGATGTGGAT AATCCTGCCG ATTCCGTATT TTGTGCCCAG
GGTTCCGGCT ATTTGGTCCC CTGGTATCAA GTCAAGGAAT ATATGCATGT GGAAAGCTAT
TTCGCCAAAG AGAGTGAATT CATAGATGCA GAGTCTCATC TGCAGATACC CTATGCCGAG
GAAAGGTGGA TCGACCCGGA GGAGATCGAC AGGATCCTCA ACCAGACCTA TTATGCCAAC
CAAGGCAAAA AATCCCTTTG GCAGAAACGG AAAAAAGCTG TGGAAAGCTA TTATAGACCA
CCTGCCGATT TAAACAAACC TAAAGAAAGC CAGGAAGAAT ATCTTCTTGT GGACGGCTAT
AATATTATCT TTGACTGGCC GGAACTGAAA GAGCTTGCCC AGGATAATAT GGATGGAGCC
AGGATAAGGC TGCTTGATAT CCTAAGCAAT TATCAGGGGA TTCGCAAGTG CCGGATTATC
GTCGTCTTCG ATGCTTATCG TGTTCAGGGG CATCCCGAGG AAGCCATCGA TTATCATAAT
ATCCTGATGG TCTATACCAA AGAAGCGCAA ACCGCGGATC AATATATTGA AAGGTTTGCT
TATGATCATC AGAAAAAGTA TAAGATCACC GTGGCTACCT CCGATGGCCT GCAGCAGATC
ATTATCAGAG GGGCAGGGTG CGCCTTATTA TCCGCCCGAG ATTTGAAGGA AGAAGTCATA
ATGGCCAATA AACAGGTCAT CGAGGCTTAT CAGGCACAAC AAACGCCGAC CCGGCATTAT
CTGAAGGATG CCTTATCTGC CGAAAGCGAA CAGCAGATGA AAGAGTTCCT TAAAAGAGAG
AAGGATTAG
|
|---|
| Protein sequence | MKKLVIGLCA HVDAGKTTLS ESMLYLSGAI RKMGRVDNKD AHLDTFELER ARGITIFSKQ
ALLEVAHTQI TLLDTPGHVD FSLEMERTLQ VLDYAVLVIN GADGVQGHTR TLWHLLDIYQ
TPVFLFINKM DQVGTDREKL INELKSQLSD GCIDFGQPES TDFYDQLAMC DEMLLDAYVD
TGHIELPLIR EGIRKRKVYP CFFGSALKLE GVEELLQGIV DYAHLPAYPE SFGAKVFKIG
RDEQGNRLTY LKITGGRLKV RESLSNGVWE EKVNQIRIYS GKKFEAVNEV EAGSVCAVTG
LTLTKPGEGL GTETAAHSPL LEPVLAYQMI LPEGCDPRVM MPKLRQLEEE DPGLQVVWDE
ELREIQVQMM GEVQLEILQS LIRSRFGLEV SFGSGRIVYK ETIGNAVEGV GHFEPLRHYA
EVHLLMEPGE RGSGLQFGAQ CSEDSLSKSW QRLVLSHLEE KVHKGVLTGS PITDLKITLV
SGRAHTKHTD GGDFREATYR AVRQGLMEAE SILLEPYYAF QLELPEKMVG RAMNDVEKMH
GTCQLARIEG ERATLTGSAP VATMRNYQQE VMAYSKGLGR LFCSLKGYEP CHNPDEVIAM
AGYDPERDVD NPADSVFCAQ GSGYLVPWYQ VKEYMHVESY FAKESEFIDA ESHLQIPYAE
ERWIDPEEID RILNQTYYAN QGKKSLWQKR KKAVESYYRP PADLNKPKES QEEYLLVDGY
NIIFDWPELK ELAQDNMDGA RIRLLDILSN YQGIRKCRII VVFDAYRVQG HPEEAIDYHN
ILMVYTKEAQ TADQYIERFA YDHQKKYKIT VATSDGLQQI IIRGAGCALL SARDLKEEVI
MANKQVIEAY QAQQTPTRHY LKDALSAESE QQMKEFLKRE KD
|
|---|
| |